escalante-bio / boltz-binder-designLinks
multi-objective protein design
☆56Updated last week
Alternatives and similar repositories for boltz-binder-design
Users that are interested in boltz-binder-design are comparing it to the libraries listed below
Sorting:
- All-atom protein generation using latent diffusion, with compositional function and taxonomic prompts. http://bit.ly/plaid-proteins☆92Updated last week
- Official repository for DiffPepBuilder and DiffPepDock tools☆94Updated this week
- Sidechain conditioning and modeling for full-atom protein sequence design☆106Updated 3 months ago
- ☆112Updated this week
- DFMDock (Denoising Force Matching Dock), a diffusion model that unifies sampling and ranking within a single framework.☆44Updated 2 months ago
- ☆60Updated last week
- Structure-conditioned masked language modeling for protein sequence design☆62Updated last year
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆95Updated 10 months ago
- A benchmark for 3D biomolecular structure prediction models☆60Updated 3 weeks ago
- A standardized protein design benchmark for motif-scaffolding problems☆59Updated last month
- A geometric flow matching model for generative protein-ligand docking and affinity prediction. (ISMB 2025)☆91Updated 2 months ago
- The official implementation of DiffAbXL benchmarked in the paper "Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs",…☆73Updated last week
- Pytorch implementation for ICML 2024 paper Proteus: Exploring Protein Structure Generation for Enhanced Designability and Efficiency.☆77Updated 11 months ago
- A Score-Only Adaptation of AlphaFold3 for Biomolecular Structure Evaluation☆52Updated this week
- ProteusAI is a library for the machine learning driven engineering of proteins. The library enables workflows from protein structure pred…☆56Updated 3 months ago
- ☆39Updated this week
- ☆65Updated last year
- Aligning protein generative models with experimental fitness☆96Updated 3 weeks ago
- Official implementation of Generative Diffusion Models for Antibody Design, Docking, and Optimization.☆59Updated last year
- Structure prediction of alternative protein conformations☆75Updated 3 months ago
- Official repository of EnzymeFlow☆92Updated 6 months ago
- Multi-domain Distribution Learning for De Novo Drug Design☆88Updated 2 months ago
- Joint embedding of protein sequence and structure with discrete and continuous compressions of protein folding model latent spaces. http:…☆122Updated last month
- ☆108Updated 2 years ago
- ☆94Updated this week
- Public Release of ProGen3 family of Models☆70Updated last month
- Learning to design protein-protein interactions with enhanced generalization (ICLR 2024)☆44Updated 4 months ago
- Plugin for folding sequences directly in PyMOL☆98Updated 3 months ago
- A list of manuscripts/tools using diffusion on biological enttieis☆96Updated last year
- This repository implements Gibbs sampling with Graph-based Smoothing☆38Updated last year