☆17Jul 13, 2026Updated last month
Alternatives and similar repositories for CIRI3
Users that are interested in CIRI3 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Analysis for "K27M in canonical and noncanonical H3 variants occurs in distinct oligodendroglial cell lineages in brain midline gliomas" …☆10Oct 17, 2024Updated last year
- LorMe package for R：Lightening One-code Resolving Microbial Ecology Program☆18Jul 20, 2026Updated last month
- PhyloForge: Unifying micro and macro evolution with comprehensive genomic signals☆10May 17, 2024Updated 2 years ago
- An R package for finding non-adenosine residues in poly(A) tails of ONT direct RNA sequencing reads☆16Aug 10, 2026Updated 3 weeks ago
- The Functional Analysis through Hidden Markov Models Software and Server☆14Nov 6, 2014Updated 11 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆13Aug 24, 2026Updated last week
- Code repository for the HAYSTAC pipeline☆18Oct 25, 2024Updated last year
- Pathogenfinder2☆19Apr 20, 2026Updated 4 months ago
- Kyoto Encylopedia of Genes and Genomes (KEGG) NetworkX Topological parser automates downloading, parsing, and converting from a KEGG Mark…☆12May 8, 2024Updated 2 years ago
- Codes for Vmap1.1 and Vmap3☆11Jan 5, 2026Updated 7 months ago
- Deep learning based imputation of RNA secondary structure profile.☆16May 1, 2022Updated 4 years ago
- A method of assessing sequence complexity based on kmer frequencies☆33Apr 9, 2018Updated 8 years ago
- ☆10Nov 9, 2022Updated 3 years ago
- A machine learning approach to alignment filtering☆16Jun 18, 2026Updated 2 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- lossless nanopore pod5 <=> s/blow5 file conversion☆49Updated this week
- A software for calculating telomere length☆78Oct 24, 2018Updated 7 years ago
- ☆18Apr 26, 2026Updated 4 months ago
- Bioinformatic Application for Quantification and LAbeling of VirAl taxonomy☆18Jul 13, 2026Updated last month
- Development repository for R package 'PLSDAbatch ' hosted on Bioconductor.☆16Jun 26, 2026Updated 2 months ago
- Here, we report telomere-to-telomere (T2T) gap-free genomes for domesticated pepper Capsicum annuum and wild relative Capsicum rhomboideu…☆13Feb 18, 2024Updated 2 years ago
- Get the consensus sequences from SAM (and BAM) files, ignoring the reference☆14Oct 27, 2019Updated 6 years ago
- create a interactive coverage plot dashboard from bam files and add gb, vcf and bed tracks☆58Updated this week
- Cancer circRNA identification pipeline with an ensemble approach☆19May 18, 2026Updated 3 months ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- the miscellaneous analysis scripts used in the research of pan-Zea genome and genetics☆17Aug 25, 2022Updated 4 years ago
- Solvent Accessible Surface calculation software for biomolecules.☆20Apr 23, 2023Updated 3 years ago
- HyLight is a strain aware de novo assembly method based on the overlap-layout-consensus (OLC) paradigm that leverages the strengths of NG…☆12Sep 18, 2024Updated last year
- The importance of converting relative to absolute abundance in the context of microbial ecology: Introducing the user-friendly DspikeIn R…☆17Jun 23, 2026Updated 2 months ago
- 基因组组装注释流程及脚本☆15Feb 12, 2023Updated 3 years ago
- a tool to detect differentially expressed circular RNA☆13Nov 12, 2025Updated 9 months ago
- Mapping 3′UTR alternative polyadenylation quantitative trait loci through population-scale transcriptomic and genomic data☆17Mar 15, 2023Updated 3 years ago
- MirMachine, a command line tool to detect microRNA homologs in genome sequences.☆15Aug 19, 2026Updated last week
- ☆12May 14, 2025Updated last year
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- Analyse RNA feature distributions.☆21Dec 16, 2024Updated last year
- A nextflow pipeline for calling modifications in nanopore reads.☆16Updated this week
- ☆28Apr 5, 2026Updated 4 months ago
- Translocator: local realignment and global remapping enabling accurate translocation detection using single-molecule sequencing long read…☆12Jan 22, 2020Updated 6 years ago
- numerical derivative lib☆13Mar 18, 2014Updated 12 years ago
- xQTLbiolinks: an R package for integrative analysis with xQTL data☆18Jan 29, 2026Updated 7 months ago
- wiki for the mothur software package☆24Apr 28, 2026Updated 4 months ago