Source code for MutPred2.0
☆15Mar 27, 2025Updated 11 months ago
Alternatives and similar repositories for mutpred2
Users that are interested in mutpred2 are comparing it to the libraries listed below
Sorting:
- Cyclic DNA Sequence Aligner☆11Apr 15, 2020Updated 5 years ago
- pyRMSD is a small Python package that aims to offer an integrative and efficient way of performing RMSD calculations of large sets of str…☆27Aug 20, 2020Updated 5 years ago
- Julia tools for reading Crystallographic Information Framework (CIF) files and dictionaries☆15Feb 2, 2026Updated last month
- 🔗 PyTorch implementation of the Parallelized Natural Extension Reference Frame algorithm☆19Sep 8, 2018Updated 7 years ago
- Deep convolutional networks for fold recognition☆22Nov 8, 2019Updated 6 years ago
- Transferable Double Exponential non-bonded potential for condensed phase simulations of small molecules☆25Feb 4, 2026Updated 3 weeks ago
- Use AlphaFold by Deep Mind in Batch Mode + Multiprocessing☆23Aug 5, 2021Updated 4 years ago
- Julia interface to ViennaRNA for RNA structure prediction and analysis☆23Apr 16, 2024Updated last year
- Fully convolutional neural networks for protein residue-residue contact prediction☆43Mar 25, 2019Updated 6 years ago
- Multivariate Gaussian Direct Coupling Analysis for residue contact prediction in protein families - Julia module☆22Jan 27, 2022Updated 4 years ago
- OPUS-Fold: An Open-Source Protein Folding Framework Based on Torsion-Angle Sampling☆21May 4, 2020Updated 5 years ago
- ☆26May 9, 2022Updated 3 years ago
- ☆21Nov 13, 2023Updated 2 years ago
- OpenSMILES parser in Julia☆26Oct 29, 2022Updated 3 years ago
- MARS: improving Multiple circular sequence Alignment using Refined Sequences☆31May 2, 2025Updated 10 months ago
- Self explained tutorial for molecular dynamics simulation using gromacs☆44Nov 16, 2024Updated last year
- Graph Inference on MoLEcular Topology☆26Mar 25, 2023Updated 2 years ago
- Sorting Intolerant From Tolerant For Genomes☆31Nov 3, 2017Updated 8 years ago
- AlphaLink: Integrating crosslinking MS data into OpenFold☆73Dec 14, 2023Updated 2 years ago
- ☆34Jun 29, 2024Updated last year
- quantum dynamics simulation environment☆33Updated this week
- Home of the public Martini 3 lipid parameters☆19Sep 29, 2025Updated 5 months ago
- An efficient tool for cross-population fixation index estimation on variant call format files☆11Jan 12, 2024Updated 2 years ago
- Adaptive string method implementation in AmberTools23 and Amber22☆14Jan 7, 2025Updated last year
- Detecting Archaic Introgression from Population Genetic Data with S*☆10Jan 28, 2026Updated last month
- OpenMM plugin that implements (an)isotropic polarizable point dipoles and multipoles up to octopoles.☆11Feb 7, 2025Updated last year
- Run OpenMM with forces provided by any Python program☆39Dec 25, 2024Updated last year
- WebGL based molecular viewer☆36Feb 13, 2026Updated 2 weeks ago
- ☆37Jul 22, 2019Updated 6 years ago
- Deciphering protein evolution and fitness landscapes with latent space models☆37Nov 2, 2021Updated 4 years ago
- Fast and easy contact prediction.☆38May 24, 2024Updated last year
- Accelerated molecular crystal structure determination from powder diffraction data☆13Jun 20, 2025Updated 8 months ago
- ☆16Jan 30, 2026Updated last month
- Screen interactions with AlphaFold Multimer☆13Mar 10, 2025Updated 11 months ago
- Postprocessing gadgets for output generated by RevBayes☆14Feb 22, 2026Updated last week
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆11Jul 8, 2021Updated 4 years ago
- The official GitHub repository for the Nature Communications paper "Computational Design of Generalist Cyclopropanases with Stereodiverge…☆13Jan 23, 2026Updated last month
- Educational Notes on Molecular Modeling☆13Nov 19, 2020Updated 5 years ago
- SYNPHONI is a tool designed for reconstructing the dynamic evolution of syntenic relationships across all scales of phylogenetic distance…☆12May 7, 2023Updated 2 years ago