Alternatives and similar repositories for alphafold-analyser:

Users that are interested in alphafold-analyser are comparing it to the libraries listed below

• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆33Updated 2 years ago
• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆21Updated 11 months ago
• nmatzke / 3diphy
  Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…
  ☆18Updated 7 months ago
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆36Updated 3 weeks ago
• lehner-lab / DiMSum
  An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies
  ☆30Updated last month
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆11Updated 2 weeks ago
• PombertLab / 3DFI
  The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.
  ☆19Updated 10 months ago
• harmslab / topiary
  Python framework for doing ancestral sequence reconstruction
  ☆37Updated 6 months ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• lehner-lab / DMS2structure
  Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019
  ☆17Updated 5 years ago
• julianeweller / MinsePIE
  Modelling insertion efficiency for Prime Insertion Experiments
  ☆13Updated 9 months ago
• BolognaBiocomp / deepsig
  DeepSig - Predictor of signal peptides in proteins based on deep learning
  ☆26Updated last year
• athchen / beer
  Bayesian enrichment estimation in R
  ☆10Updated 2 years ago
• esbgkannan / chumby
  A package for making tree-based visualizations for embedding vectors
  ☆9Updated last year
• ibivu / PRALINE
  Next-generation PRALINE sequence alignment program.
  ☆9Updated 5 years ago
• slimsuite / SLiMSuite
  Open source short linear motif discovery and sequence analysis
  ☆23Updated 4 months ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆26Updated this week
• althonos / pyfamsa
  Cython bindings and Python interface to FAMSA, an algorithm for ultra-scale multiple sequence alignments.
  ☆30Updated 3 weeks ago
• matsengrp / phip-flow
  A Nextflow pipeline to align, merge, and organize large PhIP-Seq datasets
  ☆11Updated 2 months ago
• GfellerLab / PRIME
  PRedictor of IMmunogenic Epitopes
  ☆17Updated 8 months ago
• amaurypm / pseqsid
  Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.
  ☆14Updated 11 months ago
• vicruiser / 3Dmapper
  Map genetic variants and protein positions to protein interfaces in 3D
  ☆13Updated last year
• Arcadia-Science / 2023-nr-clustering
  Clustering the NCBI nr database with mmseq2 (90% length, 90% identity). Inspired by the NCBI's experimental ClusteredNR database.
  ☆23Updated last year
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆45Updated 5 months ago
• GCA-VH-lab / uorf4u
  uorf4u is a bioinformatics tool for conserved upstream ORF annotation.
  ☆13Updated last week
• ctokheim / deepDegron
  Deep learning model to predict degron sequences
  ☆19Updated last year
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• cbcrg / msa-af2-nf
  Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models
  ☆12Updated 2 years ago
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆30Updated 11 months ago
• KarchinLab / HotMAPS_2016
  Detects hotspot regions for somatic mutations in 3D protein structures
  ☆2Updated 10 months ago