Alternatives and similar repositories for alphafold-analyser:

Users that are interested in alphafold-analyser are comparing it to the libraries listed below

• ThomasCMcLean / LazyAF
  Code for LazyAF pipeline
  ☆21Updated last year
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆35Updated 2 years ago
• dincarnato / RNAFramework
  RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis
  ☆37Updated this week
• esbgkannan / chumby
  A package for making tree-based visualizations for embedding vectors
  ☆9Updated 2 years ago
• kWeissenow / MutAmore
  Rendering protein mutation movies from predicted 3D structures
  ☆20Updated last year
• PombertLab / 3DFI
  The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.
  ☆19Updated 11 months ago
• psipred / merizo_search
  Fast protein domain structure embedding+search tool
  ☆13Updated last month
• lehner-lab / DiMSum
  An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies
  ☆30Updated this week
• Benjamin-Lee / CodonAdaptationIndex
  Python Implementation of Codon Adaption Index
  ☆36Updated 2 years ago
• KULL-Centre / _2022_functional-sites-cagiada
  ☆22Updated last year
• hgbrian / biocolabs
  a collection of colabs useful for molecular biology
  ☆31Updated last year
• nmatzke / 3diphy
  Maximum likelihood structural phylogenetics by including Foldseek 3Di characters. Supporting Information for Puente-Lelievre et al. 2023n…
  ☆18Updated 8 months ago
• GfellerLab / PRIME
  PRedictor of IMmunogenic Epitopes
  ☆17Updated 9 months ago
• uio-bmi / compairr
  Comparison of Adaptive Immune Receptor Repertoires
  ☆26Updated last month
• ctokheim / deepDegron
  Deep learning model to predict degron sequences
  ☆19Updated 2 years ago
• amaurypm / pseqsid
  Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.
  ☆14Updated last year
• harmslab / topiary
  Python framework for doing ancestral sequence reconstruction
  ☆37Updated 7 months ago
• KarchinLab / HotMAPS_2016
  Detects hotspot regions for somatic mutations in 3D protein structures
  ☆2Updated 11 months ago
• slimsuite / SLiMSuite
  Open source short linear motif discovery and sequence analysis
  ☆23Updated 5 months ago
• santiago1234 / iCodon
  iCodon customizes gene expression based on the codon composition
  ☆14Updated last year
• statbiophys / soNNia
  ☆14Updated last week
• vicruiser / 3Dmapper
  Map genetic variants and protein positions to protein interfaces in 3D
  ☆13Updated last year
• athchen / beer
  Bayesian enrichment estimation in R
  ☆10Updated 2 years ago
• Pharmaco-OmicsLab / EasyPubPlot
  Shiny app to easily create publishable plots for scientific papers
  ☆28Updated 2 weeks ago
• cbcrg / msa-af2-nf
  Nextflow pipeline for the computation of structure-based MSAs with AlphaFold2 models
  ☆12Updated 2 years ago
• andrewguy / biostructmap
  A Python package for mapping sequence aligned data onto protein structures
  ☆34Updated 3 years ago
• saketkc / pyseqlogo
  Python package to plot sequence logos
  ☆29Updated last year
• FowlerLab / Enrich2
  Tool for deep mutational scanning experiments.
  ☆48Updated last month
• multimeric / Unipressed
  Comprehensive Python client for the Uniprot REST API
  ☆45Updated 6 months ago
• lehner-lab / DMS2structure
  Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019
  ☆17Updated 5 years ago