Orpowell / alphafold-analyserLinks
A tool to visualise the results of AlphaFold2 and inspect the quality of structural predictions
☆13Updated 2 weeks ago
Alternatives and similar repositories for alphafold-analyser
Users that are interested in alphafold-analyser are comparing it to the libraries listed below
Sorting:
- a collection of colabs useful for molecular biology☆30Updated last year
- Code for LazyAF pipeline☆20Updated last year
- Decoding the functional networks of non-model organisms☆11Updated 2 weeks ago
- Evolutionary conservation estimation of residues or nucleotides☆42Updated 3 years ago
- Protein Sequence Annotation with Language Models☆20Updated last week
- A package for making tree-based visualizations for embedding vectors☆9Updated 2 years ago
- Fast protein domain structure embedding+search tool☆21Updated 2 weeks ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆38Updated this week
- An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies☆32Updated last month
- The tRNA adaptation index☆18Updated last month
- The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.☆19Updated last year
- Scripts for "Determining protein structures using deep mutagenesis", Schmiedel & Lehner, Nature Genetics, 2019☆17Updated 5 years ago
- Template-based RNA secondary structure visualization☆26Updated 6 months ago
- Calculates pairwise sequence identity, similarity and normalized similarity score of proteins in a multiple sequence alignment.☆15Updated last year
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- POC Nextflow pipeline to run the Chai-1, SOTA model for biomolecular structure prediction☆11Updated 4 months ago
- Modelling insertion efficiency for Prime Insertion Experiments☆13Updated last year
- A quick and easy way to download the genomes/predicted proteins of taxa available in JGI's Genome Portal.☆36Updated 9 months ago
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆29Updated last year
- G4Hunter (2012_2015)- IECB - Bordeaux☆13Updated 5 years ago
- Epitope immunogenicity prediction through in silico TCR-peptide contact potential profiling.☆24Updated last year
- Map genetic variants and protein positions to protein interfaces in 3D☆13Updated last year
- A domain parser for Alphafold models☆38Updated last year
- A platform to do RNA science☆27Updated 4 years ago
- Bayesian enrichment estimation in R☆11Updated 2 years ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- Detects hotspot regions for somatic mutations in 3D protein structures☆2Updated last year
- DeepSig - Predictor of signal peptides in proteins based on deep learning☆26Updated 2 years ago
- CRISPR Indel, base edit analysis☆10Updated 4 years ago
- an online cancer cell line catalogue integrating HLA type, predicted neo-epitopes, virus and gene expression☆10Updated last year