A provenance library for bioinformatics workflows 🧬 🔀 📝
☆14Oct 5, 2021Updated 4 years ago
Alternatives and similar repositories for BioProv
Users that are interested in BioProv are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Metaphor: a general-purpose workflow for assembly and binning of metagenomes☆40Nov 14, 2025Updated 4 months ago
- Enabling research software engineers to add citability in open source software without hassle.☆10Feb 27, 2022Updated 4 years ago
- Flask app for gene over-representation analysis based on Wikidata.☆21Nov 26, 2024Updated last year
- GitHub template repository for creating new barebones Nextflow pipelines, using the Arcadia-Science/nextflow-template cookiecutter templa…☆13Mar 21, 2023Updated 3 years ago
- SimRA (Simulation based on Random-graphs Algorithms) is a framework for simulating generic and complex evolutionary scenarios of multiple…☆13Nov 28, 2022Updated 3 years ago
- A prototype for organizing bibliography notes using Wikidata☆14Nov 8, 2023Updated 2 years ago
- A Hierarchical Softmax Framework for PyTorch☆22Jul 10, 2025Updated 8 months ago
- Code Contributor Network Graph☆16Mar 3, 2021Updated 5 years ago
- A repository for brainstorming and prototyping ideas related to the eLifeSprint project Annotate them all (https://sprint.elifesciences.o…☆15Jun 15, 2021Updated 4 years ago
- PipeTaxon exposes the ncbi taxonomy database as a REST API.☆22Feb 15, 2023Updated 3 years ago
- Orthoflow is a workflow for phylogenetic inference of genome-scale datasets of protein-coding genes.☆15Feb 24, 2025Updated last year
- Colinear block visualisation tool☆31Jan 17, 2024Updated 2 years ago
- cookiecutter template for Wikimedia Toolforge tools using Flask☆25Nov 19, 2025Updated 4 months ago
- Design primers for species-specific qPCR☆10Jun 1, 2017Updated 8 years ago
- Script, capture and replay terminal sessions☆16Dec 5, 2023Updated 2 years ago
- Get microbial sequence data easier and faster☆28Nov 7, 2019Updated 6 years ago
- Omeka S module for describing resources using values and URIs from Wikidata☆21Apr 10, 2025Updated 11 months ago
- GitHub Action to analyze a GitHub repository’s compliance with the fair-software.eu recommendations.☆21Apr 11, 2025Updated 11 months ago
- All you need to get started in the Rust Programming Language☆10Jun 5, 2022Updated 3 years ago
- ☆11Sep 16, 2021Updated 4 years ago
- The gview wiki migrated to GitHub.☆11Sep 3, 2020Updated 5 years ago
- MetaPORE – Chiu Laboratory, University of California, San Francisco☆12Nov 4, 2015Updated 10 years ago
- A list of inspirational and thought-provoking reads about women who code.☆10Nov 20, 2025Updated 4 months ago
- ☆10Jul 15, 2016Updated 9 years ago
- Development repo for pyani-plus (the next iteration of pyani)☆27Mar 16, 2026Updated last week
- Simple tool to plot input piped to it☆14Mar 12, 2023Updated 3 years ago
- BRIG is a cross-platform (Windows/Mac/Linux) application that displays circular comparison images of multiple genomes using BLAST.☆46Mar 1, 2026Updated 3 weeks ago
- statdivlab's teaching materials for STAMPS @ the MBL in 2019☆11Jul 28, 2019Updated 6 years ago
- ☆10Aug 22, 2018Updated 7 years ago
- Protologgger is a tool for the description of novel taxa by providing taxonomic, functional and ecological insights☆17Nov 24, 2025Updated 4 months ago
- A bot to add citation data from OpenCitations to Wikidata☆12May 23, 2023Updated 2 years ago
- ☆12Jan 29, 2020Updated 6 years ago
- DID Coding web app that uses Django web framework and Googles Maps API to retrieve directions and distance between 2 geo points☆14May 18, 2021Updated 4 years ago
- ☆10Jun 29, 2021Updated 4 years ago
- ☆13Mar 28, 2018Updated 7 years ago
- Wikidata service to help create or link author items to published articles☆35Jun 21, 2025Updated 9 months ago
- Espalier is a Python package for working with discordant phylogenetic trees using maximum agreement forests.☆14Jul 19, 2023Updated 2 years ago
- multiGenomicContext is a pipeline to see your protein in many genomic context as much as gbk you have.☆11Oct 10, 2022Updated 3 years ago
- R package for comparison of synteny conservation at the genome-wide scale.☆14Jun 6, 2024Updated last year