Utilize Terra docker images in GCP VM.
☆26May 20, 2026Updated 5 months ago
Alternatives and similar repositories for Non-Terra-GCP
Users that are interested in Non-Terra-GCP are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Molecular Oncology Almanac, a clinical interpretation algorithm paired with a novel underlying knowledge base for precision cancer medici…☆43Oct 22, 2026Updated last week
- ☆18Mar 10, 2026Updated 7 months ago
- ☆16Apr 4, 2023Updated 3 years ago
- Gaussian imputation of GWAS summary statistics☆15Apr 16, 2015Updated 11 years ago
- V2 version of the sundai website☆22Updated this week
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Lazily load multiscale whole-slide images with openslide and dask☆34Dec 6, 2022Updated 3 years ago
- DeTiN is designed to measure tumor-in-normal contamination and improve somatic variant detection sensitivity when using a contaminated ma…☆53May 20, 2022Updated 4 years ago
- DENTIST (Detecting Errors iN analyses of summary staTISTics) is a QC tool for summary-data-based analyses.☆30Oct 5, 2023Updated 3 years ago
- ☆42Mar 30, 2026Updated 7 months ago
- 🧹 Remove technical noise from single-cell RNA sequencing count data with expectation-maximization☆30Oct 9, 2026Updated 3 weeks ago
- Somatic copy variant caller (CNV) for next generation sequencing☆80Sep 12, 2024Updated 2 years ago
- Alleloscope is a method for allele-specific copy number estimation that can be applied to single cell DNA and ATAC sequencing data (separ…☆32Mar 10, 2023Updated 3 years ago
- Estimate local SNP heritability and genetic covariance from GWAS summary association statistics.☆43May 2, 2018Updated 8 years ago
- Fast motif matching in R☆50Jan 24, 2024Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆82Updated this week
- CoMut is a Python library for visualizing genomic and phenotypic information via comutation plots☆99Aug 1, 2024Updated 2 years ago
- ☆48Sep 15, 2026Updated last month
- Cell type specific enrichments using finemapped variants and quantitative epigenetic data☆51Sep 1, 2023Updated 3 years ago
- Code used to benchmark Xenium☆88Apr 10, 2026Updated 6 months ago
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆399Jul 23, 2025Updated last year
- ☆60May 12, 2021Updated 5 years ago
- GrandQC tool for tissue detection and quality control in pathology☆130Dec 27, 2025Updated 10 months ago
- Software implementing the Latent Causal Variable Model☆70Jun 30, 2020Updated 6 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- QuPath extension for Segment Anything Model (SAM)☆138Feb 15, 2026Updated 8 months ago
- ☆103Jul 21, 2025Updated last year
- R package of colors for the Buenrostro Lab☆91Aug 21, 2024Updated 2 years ago
- Probabilistic cell segmentation for in situ spatial transcriptomics☆199Oct 17, 2026Updated 2 weeks ago
- Haplotype-aware CNV analysis from single-cell RNA-seq, ATAC-seq, and multiome☆232Feb 4, 2026Updated 8 months ago
- ☆104Jul 29, 2026Updated 3 months ago
- Implements *CellAnnotator (aka *CAT/starCAT), annotating scRNA-Seq with predefined gene expression programs☆117Sep 17, 2026Updated last month
- A tool for detecting somatic variants in single cell data☆229Sep 15, 2024Updated 2 years ago
- Data processing and analysis related code associated with the study "A single-cell and spatially resolved atlas of human breast cancers".☆138Sep 24, 2024Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- 📝 Automated manuscript validation and submission portal completion☆208Updated this week
- Fast Principal Component Analysis of Large-Scale Genome-Wide Data☆147Jul 26, 2022Updated 4 years ago
- Command-line tool for the visualization of splicing events across multiple samples☆143Jun 28, 2024Updated 2 years ago
- R package with collection of functions created and/or curated to aid in the visualization and analysis of single-cell data using R.☆315Jun 30, 2026Updated 4 months ago
- Use Images in ggplot2☆179Oct 16, 2026Updated 2 weeks ago
- Technology-invariant pipeline for spatial omics analysis that scales to millions of cells (Xenium / Visium HD / MERSCOPE / CosMx / PhenoC…☆297Updated this week
- SEACells algorithm for Inference of transcriptional and epigenomic cellular states from single-cell genomics data☆203Aug 24, 2026Updated 2 months ago