LewisLabUCSD / PinAPL-PyLinks
A no hassle tool for analyzing your favorite CRISPR screen dataset!
☆11Updated 4 years ago
Alternatives and similar repositories for PinAPL-Py
Users that are interested in PinAPL-Py are comparing it to the libraries listed below
Sorting:
- ⚙️ Matching T-cell repertoire against a database of TCR antigen specificities☆39Updated 6 years ago
- A novel PSSM based software for predicting class I peptide-HLA binding affinity☆17Updated 8 years ago
- MuPeXI: the mutant peptide extractor and informer, a tool for predicting neo-epitopes from tumor sequencing data.☆51Updated 6 years ago
- BAGEL software☆28Updated last year
- DRUGZ software☆24Updated 4 years ago
- ☆49Updated 3 years ago
- ☆20Updated 3 years ago
- xOmicsShiny: an R Shiny application for cross-omics data analysis and pathway mapping, Bioinformatics Advances, Volume 5, Issue 1, 2025, …☆34Updated last week
- Visual exploratory analysis of gene expression data☆43Updated last month
- 3D hotspot mutation proximity analysis tool☆49Updated 2 years ago
- University of Cambridge PhD thesis☆16Updated 4 years ago
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Updated 6 years ago
- A quick and flexible single-cell RNA-seq processing framework on the cloud☆39Updated 5 years ago
- Computational correction of copy-number effect in CRISPR-Cas9 essentiality screens☆30Updated 6 years ago
- ChIP-seq DC and QC Pipeline☆36Updated 4 years ago
- IGoR is a C++ software designed to infer V(D)J recombination related processes from sequencing data. Find full documentation at:☆52Updated 3 years ago
- A shiny-based web tool for interactive analysis of DepMap data☆24Updated 4 years ago
- ☆15Updated 3 years ago
- Decombinator v5: fast, error-correcting analysis of TCR repertoires☆27Updated last month
- ☆18Updated 10 years ago
- Toolkit for benchmarking fusion transcript predictions☆19Updated last year
- GREIN : GEO RNA-seq Experiments Interactive Navigator☆50Updated 6 years ago
- 🏺 Exploring novel tumor epitope identification☆36Updated 5 years ago
- Seq2Neo: a comprehensive pipeline for cancer neoantigen immunogenicity prediction☆21Updated 2 years ago
- ☆12Updated 7 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆24Updated 3 years ago
- Python package to annotate and visualize gene fusions.☆64Updated last year
- ARCHS4 RNA-seq processing scripts and web server pages.☆60Updated 4 years ago
- ☆38Updated 7 years ago
- Adaptive Daisy Model to discriminate core-fitness/context-specific essential genes in large scale CRISPR-Cas9 screens☆23Updated 6 years ago