haichengyi / ACP-DL
A deep learning model to predict anticancer peptides.
☆22Updated 5 years ago
Alternatives and similar repositories for ACP-DL:
Users that are interested in ACP-DL are comparing it to the libraries listed below
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆51Updated 11 months ago
- Pipeline for assessing the tractability of potential targets (starting from Gene IDs)☆24Updated 3 months ago
- Use machine learning to design codon-optimized DNA sequences for increased protein expression.☆15Updated 2 years ago
- Python package and command line tool for epitope prediction☆51Updated 9 months ago
- Multi-Channel Deep Chemogenomic Modeling of Receptor-Ligand Binding Affinity Prediction for Drug Discovery☆27Updated 3 years ago
- Deep-learning empowered prediction and generation of immunogenic epitopes for T cell immunity☆68Updated 2 years ago
- Code associated with "Biophysical prediction of protein-peptide interactions and signaling networks using machine learning."☆70Updated last year
- chemmodlab: A Cheminformatics Modeling Laboratory for Fitting and Assessing Machine Learning Models☆16Updated last year
- ☆25Updated last year
- TransDTI: Transformer-based language models for estimating DTIs and building a drug-recommendation workflow☆11Updated 2 years ago
- Convert PDB residues to their Uniprot equivalents☆17Updated 5 years ago
- Interpretation by Deep Generative Masking for Biological Sequences☆37Updated 3 years ago
- Prediction of binding residues for metal ions, nucleic acids, and small molecules.☆32Updated 4 months ago
- HoTS: Sequence-based prediction of binding regions and drug-target interactions.☆26Updated 2 years ago
- This repository contains the stand-alone tool for MusiteDeep server☆33Updated 4 years ago
- ☆24Updated 3 years ago
- ☆21Updated 2 years ago
- Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.☆59Updated last month
- KDS software for Kinase Drug Selectivity☆11Updated last year
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆10Updated 2 years ago
- TargetDB is a tool to quickly querry multiple publicly available databases and provide an integrated view of the information available ab…☆32Updated 10 months ago
- Predict the structure of immune receptor proteins☆48Updated 6 months ago
- ☆34Updated last week
- Computational Analysis of Novel Drug Opportunities☆36Updated 2 months ago
- ☆28Updated last year
- NodeCoder is a general framework based on graph convolutional neural network for protein function prediction.☆33Updated last year
- Methods for mapping genomic data onto 3D protein structure.☆28Updated 2 years ago
- comparing drug classification methods☆19Updated 5 years ago
- CapsNet for Protein Post-translational Modification site prediction.☆25Updated 5 years ago
- iFeatureOmega is a comprehensive platform for generating, analyzing and visualizing more than 170 representations for biological sequence…☆32Updated last year