kentnf / VirusDetect
ttt
☆9Updated 2 years ago
Alternatives and similar repositories for VirusDetect:
Users that are interested in VirusDetect are comparing it to the libraries listed below
- kASA - k-Mer Analysis of Sequences based on Amino acid-like encoding☆23Updated last year
- transposable element typing pipeline☆17Updated last year
- ☆11Updated 2 years ago
- Highly sensitive pathogen detection☆12Updated 4 years ago
- A framework for extracting telomeric reads from single-molecule sequencing experiments, describing their sequence variation and motifs, a…☆16Updated last year
- CAMSA: a tool for Comparative Analysis and Merging of Scaffold Assemblies☆24Updated 4 years ago
- A tool set to assess the quality of the per read phasing and reduce the errors.☆12Updated 4 years ago
- MapCaller – An efficient and versatile approach for short-read alignment and variant detection in high-throughput sequenced genomes☆30Updated 4 years ago
- mtDNA-Server 2: A web-service and Nextflow pipeline for mitochondrial genomes☆12Updated 3 months ago
- ☆19Updated last year
- A comparative genome scaffolding tool☆17Updated 6 years ago
- ☆12Updated 3 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated 9 months ago
- Transposon Insertion Finder - Detection of new TE insertions in NGS data☆20Updated 2 years ago
- A pipeline for whole genome assembly☆16Updated 2 years ago
- Simultaneous multi-sample transcript assembler for RNA-seq data☆17Updated 3 months ago
- Tools for finding mobile element insertions from single-end datasets☆23Updated 5 years ago
- Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)☆29Updated 3 months ago
- Pan gGnome Viewer☆10Updated last year
- Flexible linear mixed model framework for Genome Wide Association Studies☆19Updated last month
- ☆15Updated 7 years ago
- DETONATE: DE novo TranscriptOme rNa-seq Assembly with or without the Truth Evaluation☆13Updated 8 years ago
- Functions to compare a SV call sets against a truth set.☆29Updated 11 months ago
- Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs☆24Updated 11 months ago
- (Obsolete) NCBI Prokaryotic Genome Annotation Pipeline. New site:☆16Updated 6 years ago
- The shiny app that accompanies the ngsReports R package☆14Updated 3 years ago
- easy_sbatch - Batch submitting Slurm jobs with script templates☆17Updated 3 years ago
- Find Unique genomic Regions☆29Updated last week
- Genotyping of segregating mobile elements insertions☆19Updated 3 years ago
- A transposition caller.☆10Updated last year