tpq / balanceLinks
[OFFICIAL] [CoDA] An R package to visualize balances of compositional data without dendrograms
☆8Updated 3 years ago
Alternatives and similar repositories for balance
Users that are interested in balance are comparing it to the libraries listed below
Sorting:
- ALDEx_bioc is the working directory for updating bioconductor☆28Updated last month
- MIMIX: a Bayesian Mixed-Effects Model for Microbiome Data from Designed Experiments☆11Updated 4 years ago
- A fast method for analysis of composition of microbiomes☆8Updated 3 years ago
- A microbiome analysis toolkit for R☆23Updated last year
- R package for microbiome analysis. Provides helper functions for common workflows ranging from preprocessing to visualization.☆23Updated last year
- ☆27Updated last year
- ☆13Updated 2 years ago
- A shiny package for microbiome functional enrichment analysis☆37Updated 2 months ago
- Annotation of Metabolite Origin via Networks: A tool for predicting putative metabolite origins for microbes or between microbes and host…☆21Updated last year
- Phylogenetic Isometric Log Ratio☆19Updated 8 months ago
- Differential analysis of multi-omics data based on the Tweedie distribution☆28Updated 10 months ago
- ☆27Updated last year
- Phylogenetic Organization of Metagenomic Signals (POMS)☆19Updated 2 years ago
- tidyMicro GitHup Repository☆19Updated 3 years ago
- An R-based approach for preprocessing and aligning 16S, metagenomic, and metatranscriptomic data (PathoScope version 3.0)☆19Updated 2 weeks ago
- The dysbiosisR package implements tools for calculating some common microbiome dysbiosis measures☆15Updated 2 years ago
- MiCoP is a method for high-accuracy profiling of viral and fungal metagenomic communities.☆15Updated 3 years ago
- Handy tools for Microbiome analysis in R☆18Updated 6 years ago
- Functions for compositional analysis of high throughput sequencing☆29Updated last year
- An R package for learning log-ratio biomarkers from high-throughput sequencing data.☆23Updated 2 years ago
- Pan-genome Analysis☆12Updated last month
- Microbiome profiling☆16Updated last month
- Do microbiome analysis with dada2 and phyloseq object☆14Updated 8 months ago
- R package for fetching and parsing data of the Human Microbiome Compendium☆13Updated 5 months ago
- Model-based Genomically Informed High-dimensional Predictor of Microbial Community Metabolic Profiles☆37Updated last year
- Semi-parametric Rank-Based Correlation and Partial Correlation Estimation for Quantitative Microbiome Data☆24Updated 3 years ago
- MTD: a unique pipeline for host and meta-transcriptome joint and integrative analyses of RNA-seq data☆16Updated last year
- Fit LOg-RAtio Lasso regression for compositional covariates☆13Updated 2 months ago
- ☆15Updated 7 months ago
- microbial association network clustering algorithm☆13Updated last year