Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
☆17Jul 6, 2023Updated 3 years ago
Alternatives and similar repositories for codex_dashboard
Users that are interested in codex_dashboard are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- User-friendly Bioinformatics Tools☆18Mar 5, 2021Updated 5 years ago
- Immune Profiling of Atherosclerotic Plaques Identifies☆10Sep 18, 2023Updated 3 years ago
- rna2seg☆25May 15, 2025Updated last year
- AnnData for the browser☆14Updated this week
- ☆11Mar 2, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Spatial neighbour-aware transcript cleanup for imaging-based spatial transcriptomics data (Xenium, MERSCOPE, CosMx). XeniumClean removes…☆21Jul 19, 2026Updated 3 months ago
- Genomic Annotation Logic and Execution System☆13Apr 22, 2025Updated last year
- Spatially-resolved Transcriptomics via Epitope Anchoring☆19Apr 1, 2024Updated 2 years ago
- 在網路受限的 Docker Dev Container 裡安全執行 Claude Code,透過 iptables/ipset 防火牆白名單限制 AI Agent 的對外連線,降低資料外洩與誤操作風險。改自 Anthropic 官方 .devcontainer 參考實作。☆25Sep 12, 2026Updated last month
- Package to calculate functional similarity between genes https://biocor.llrs.dev☆14Sep 19, 2026Updated last month
- CODEX data processing code☆13Jul 1, 2025Updated last year
- Flask REST API for Open Targets Platform☆13Feb 9, 2021Updated 5 years ago
- Spatial Image Analysis of Tissues☆15Dec 8, 2022Updated 3 years ago
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 10 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- GridVar is a jQuery plugin that visualizes multi-dimensional datasets as layers organized in a row-column format.☆14Feb 21, 2014Updated 12 years ago
- ☆28Apr 8, 2025Updated last year
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Apr 11, 2023Updated 3 years ago
- Python library (C++ backend) for degree-preserving network randomization☆14Oct 14, 2019Updated 7 years ago
- integrative pathway analysis with modern PCA methodology and gene selection☆11Jun 29, 2023Updated 3 years ago
- ☆17Sep 8, 2024Updated 2 years ago
- ☆19Apr 5, 2024Updated 2 years ago
- Spatial Transcriptomics Dashboard☆27Jul 6, 2023Updated 3 years ago
- JupyterLab extension to deploy applications to Heroku☆20Dec 4, 2022Updated 3 years ago
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆11Jan 22, 2026Updated 9 months ago
- R package: AutoSpill algorithm for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data☆23Jun 17, 2021Updated 5 years ago
- Repository for Immune Atlas Research Consortium at MMRF for storing research project code☆13Oct 3, 2025Updated last year
- CytoData 2016 – origin story☆18Sep 15, 2017Updated 9 years ago
- A fast python class for reading 2-bit files (used by UCSC genome browser)☆14Aug 16, 2026Updated 2 months ago
- Data analysis scripts for scRNA-seq analysis of relapsed and refractory multiple myeloma☆10Sep 27, 2021Updated 5 years ago
- Telomerecat: The telomere computational analysis tool☆14Oct 9, 2020Updated 6 years ago
- PCA in rust☆16Jul 30, 2023Updated 3 years ago
- COMET Single-Cell Marker Detection tool☆33Jun 21, 2022Updated 4 years ago
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- A visualization tool for Systems-Level Interactive Data Exploration☆13Jan 12, 2022Updated 4 years ago
- ☆12Jul 25, 2019Updated 7 years ago
- Reconstruction of spatial context of gene expression with optimal transport☆11Mar 14, 2019Updated 7 years ago
- Python API and Jupyter widget for Vitessce☆67Updated this week
- MERFISHTools implement a Bayesian framework for accurately predicting gene or transcript expression from MERFISH data. On top, they provi…☆14Aug 9, 2019Updated 7 years ago
- Integrated Variant Caller☆17Mar 15, 2018Updated 8 years ago
- Human Primary T cells: A Practical Guide☆15Sep 18, 2018Updated 8 years ago