Single Cell Multiplexed Imaging Jupyter Voila Dashboard using CODEX Data
☆17Jul 6, 2023Updated 2 years ago
Alternatives and similar repositories for codex_dashboard
Users that are interested in codex_dashboard are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Immune Profiling of Atherosclerotic Plaques Identifies☆10Sep 18, 2023Updated 2 years ago
- User-friendly Bioinformatics Tools☆18Mar 5, 2021Updated 5 years ago
- rna2seg☆22May 15, 2025Updated 10 months ago
- ☆26Apr 8, 2025Updated last year
- ☆11Mar 2, 2021Updated 5 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆12Sep 2, 2024Updated last year
- Convert VCF (Variant Call Format) into TCGA MAF (Mutation Annotation Format)☆15Jul 15, 2016Updated 9 years ago
- Spatially-resolved Transcriptomics via Epitope Anchoring☆20Apr 1, 2024Updated 2 years ago
- Variance stabilizing transformation for Gamma Poisson distributed data☆22Apr 11, 2023Updated 3 years ago
- PCA in rust☆16Jul 30, 2023Updated 2 years ago
- web based visualisation of CLMS data☆13Nov 22, 2022Updated 3 years ago
- Genomic Annotation Logic and Execution System☆13Apr 22, 2025Updated 11 months ago
- Spatial Image Analysis of Tissues☆15Dec 8, 2022Updated 3 years ago
- Python library (C++ backend) for degree-preserving network randomization☆14Oct 14, 2019Updated 6 years ago
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click and start building anything your business needs.
- ☆15Nov 2, 2021Updated 4 years ago
- ☆17Jun 27, 2024Updated last year
- ☆10Jan 22, 2026Updated 2 months ago
- Spatial Transcriptomics Dashboard☆27Jul 6, 2023Updated 2 years ago
- JupyterLab extension to deploy applications to Heroku☆20Dec 4, 2022Updated 3 years ago
- Adjacency-constrained hierarchical clustering of a similarity matrix☆16Nov 21, 2025Updated 4 months ago
- A fast python class for reading 2-bit files (used by UCSC genome browser)☆14Oct 10, 2025Updated 6 months ago
- Telomerecat: The telomere computational analysis tool☆14Oct 9, 2020Updated 5 years ago
- COMET Single-Cell Marker Detection tool☆33Jun 21, 2022Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting with the flexibility to host WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Cloudways by DigitalOcean.
- kallisto index tag extractor☆20Jul 6, 2019Updated 6 years ago
- A visualization tool for Systems-Level Interactive Data Exploration☆12Jan 12, 2022Updated 4 years ago
- R package: AutoSpill algorithm for calculating spillover coefficients to compensate or unmix high-parameter flow cytometry data☆20Jun 17, 2021Updated 4 years ago
- Integrated Variant Caller☆17Mar 15, 2018Updated 8 years ago
- ☆10Dec 29, 2021Updated 4 years ago
- Use IPython notebook interactively on a HPC system☆20Mar 26, 2014Updated 12 years ago
- requirements, examples, and tests for expression matrix file formats☆22Sep 18, 2018Updated 7 years ago
- Abbreviate strings to short, unique identifiers☆24May 10, 2022Updated 3 years ago
- Reconstruction of spatial context of gene expression with optimal transport☆11Mar 14, 2019Updated 7 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- Human Primary T cells: A Practical Guide☆15Sep 18, 2018Updated 7 years ago
- Gene expression viewer template☆11Aug 30, 2017Updated 8 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Oct 9, 2017Updated 8 years ago
- Starter repo for regl explorations☆10May 26, 2017Updated 8 years ago
- Package to calculate functional similarity between genes https://biocor.llrs.dev☆14Oct 20, 2025Updated 5 months ago
- Splotch is a hierarchical generative probabilistic model for analyzing Spatial Transcriptomics (ST) data☆21May 19, 2025Updated 10 months ago
- The official Jupyterlab extension for conda-store☆16Nov 26, 2024Updated last year