Alternatives and similar repositories for Bayesian_tutorial

Users that are interested in Bayesian_tutorial are comparing it to the libraries listed below

• danlwarren / RWTY
  R We There Yet?
  ☆31Updated 3 months ago
• drostlab / orthologr
  Genome wide orthology inference and dNdS estimation
  ☆95Updated last year
• katholt / plotTree
  ☆67Updated 9 years ago
• emvolz / treedater
  Scalable relaxed clock phylogenetic dating
  ☆25Updated last year
• alvinxhan / PhyCLIP
  Phylogenetic Clustering by Linear Integer Programming (PhyCLIP)
  ☆19Updated 4 years ago
• biocore / wol
  Reference Phylogeny for Bacterial and Archaeal Genomes
  ☆25Updated 2 years ago
• evolbioinfo / phylodeep
  PhyloDeep is a python library for parameter estimation and model selection from phylogenetic trees, based on deep learning.
  ☆24Updated 9 months ago
• sherrillmix / taxonomizr
  Parse NCBI taxonomy and accessions to find taxonomic assignments
  ☆77Updated 4 months ago
• ms609 / TreeDist
  Calculate distances between phylogenetic trees in R
  ☆32Updated this week
• tothuhien / lsd-0.3beta
  ☆12Updated 6 years ago
• santa-dev / santa-sim
  A forward-time simulator for gene sequences modeling a variety of mutation and selection processes.
  ☆19Updated last year
• reptalex / phylofactor
  ☆27Updated last year
• BradyAJohnston / plasmapR
  Creating plasmid maps inside ggplot.
  ☆87Updated 7 months ago
• xavierdidelot / TransPhylo
  Reconstruction of transmission trees using genomic data
  ☆63Updated last year
• SchlossLab / schtools
  Schloss Lab Tools for Reproducible Microbiome Research 💩
  ☆31Updated last year
• nextgenusfs / amptk
  AMPtk: Amplicon ToolKit for NGS data (formally UFITS)
  ☆38Updated last year
• gtonkinhill / rhierbaps
  rhierbaps: R implementation of hierBAPS
  ☆35Updated 4 years ago
• KasperSkytte / ampvis2
  Tools for visualising microbial community amplicon data
  ☆67Updated 2 months ago
• YuLab-SMU / treedataverse
  Meta package for processing and visualizing tree with data
  ☆28Updated 3 years ago
• bhattlab / bhattlab_workflows
  Computational workflows for metagenomics tasks, by the Bhatt lab
  ☆47Updated 2 years ago
• gschofl / reutils
  Talk to the NCBI EUtils
  ☆22Updated 4 years ago
• evolbioinfo / pastml
  Ancestral character reconstruction and visualisation for rooted phylogenetic trees
  ☆33Updated last month
• rki-mf1 / clean
  A nextflow pipeline for decontamination of short reads, long reads and contigs
  ☆48Updated 2 weeks ago
• sjspielman / phyphy
  Python HyPhy: Facilitating HyPhy execution and parsing
  ☆21Updated 3 years ago
• Lagkouvardos / Rhea
  A set of R scripts for the analysis of microbial profiles
  ☆41Updated last year
• tothuhien / lsd2
  A phylogeny dating method using least-squares algorithms and criteria
  ☆27Updated 8 months ago
• spholmes / F1000_workflow
  ☆43Updated 7 years ago
• stajichlab / FGMP
  Fungal Genome Mapping Pipeline
  ☆19Updated 6 years ago
• Wytamma / GISAIDR
  Programmatically interact with the GISAID database.
  ☆75Updated 3 months ago
• ariloytynoja / prank-msa
  Automatically exported from code.google.com/p/prank-msa
  ☆27Updated 3 months ago