Tao Liu's open source libraries for bioinformatics (unstable, pre-alpha)
☆26Mar 23, 2021Updated 5 years ago
Alternatives and similar repositories for taolib
Users that are interested in taolib are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Simple tokenised template system for SGE☆10Mar 1, 2023Updated 3 years ago
- Software for performing UDiTaS sequencing analysis.☆15Dec 22, 2022Updated 3 years ago
- Python parser for ISAtab, a biological file format for experimental metadata☆16Nov 24, 2016Updated 9 years ago
- Computational biology utility scripts☆19Apr 16, 2025Updated 11 months ago
- Parallel Recipes : parallel workflow execution made easy☆13Sep 1, 2015Updated 10 years ago
- Wordpress hosting with auto-scaling on Cloudways • AdFully Managed hosting built for WordPress-powered businesses that need reliable, auto-scalable hosting. Cloudways SafeUpdates now available.
- DensityMap is perl tool for the visualization of features density along chromosomes☆19May 12, 2022Updated 3 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆25Mar 17, 2016Updated 10 years ago
- A multiple alignment analyser☆21Jul 28, 2021Updated 4 years ago
- Publication and sharing with Jupyter notebooks for reproducible research☆10May 10, 2019Updated 6 years ago
- Scripts, utilities and programs for genomic bioinformatics.☆83Nov 13, 2025Updated 4 months ago
- A toolkit for working with ATAC-seq data.☆24Jan 22, 2026Updated 2 months ago
- Single cell interactive plotting tools☆24Jun 12, 2020Updated 5 years ago
- A pure Python implementation of the SBOL standard.☆22Feb 13, 2025Updated last year
- A 450k tutorial in the form of an R package☆12Jul 5, 2016Updated 9 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Straightforward & minimalistic removal of poorly aligned regions in sequence alignments.☆17Mar 18, 2019Updated 7 years ago
- This is a read-only mirror of the CRAN R package repository. GOplot — Visualization of Functional Analysis Data. Homepage: https://gith…☆15Mar 30, 2016Updated 9 years ago
- API for the IGS data portal☆11May 6, 2021Updated 4 years ago
- Genome-wide reconstruction of complex structural variants☆39Jun 21, 2022Updated 3 years ago
- A wrapper for calling small variants from human germline high-coverage single-sample Illumina data☆14Jul 21, 2019Updated 6 years ago
- ☆14Jun 11, 2020Updated 5 years ago
- ORF prediction using python☆12Aug 24, 2021Updated 4 years ago
- Supplementary Code for "Mapping DNA methylation across development, genotype, and schizophrenia in the human frontal cortex"☆13Oct 27, 2015Updated 10 years ago
- A tool for bigWig files.☆118May 23, 2018Updated 7 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- Biological Graphic tool in Python☆34May 14, 2020Updated 5 years ago
- A new graphical interface for RAxML☆23Updated this week
- Supplementary files for our Aneuploidy Detection paper☆10Jul 5, 2018Updated 7 years ago
- Perl scripts for working with the GFF format☆16Aug 24, 2011Updated 14 years ago
- A collection of open source bioinformatics tools developed and used by Addgene.☆11Sep 9, 2025Updated 6 months ago
- Galaxy Docker Image for the HiCExplorer☆11Mar 3, 2019Updated 7 years ago
- Reference-based compression of SRA data☆37Mar 26, 2013Updated 13 years ago
- CRISPR discovery pipeline☆33Nov 2, 2018Updated 7 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Aug 8, 2024Updated last year
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- Ergatis is a web-based utility that is used to create, run, and monitor reusable computational analysis pipelines.☆16Jan 4, 2023Updated 3 years ago
- ENCODE Uniform processing pipeline for ChIP-seq☆124Mar 23, 2020Updated 6 years ago
- The core Mesquite repository☆111Mar 21, 2026Updated last week
- Digenome-toolkit ver2.☆16Nov 1, 2021Updated 4 years ago
- A scala based DSL and framework for writing and executing bioinformatics pipelines as Directed Acyclic GRaphs☆69May 27, 2022Updated 3 years ago
- MUltiScale enrIchment Calling for ChIP-Seq Datasets☆23Mar 14, 2019Updated 7 years ago
- TRAPPIST: Totally Rad Analysis Pipelines Python Informatics Super Tool (actually, a python-based genomics analysis toolbox)☆14Jan 25, 2018Updated 8 years ago