Tip and tricks for VCF files
☆21Sep 26, 2018Updated 7 years ago
Alternatives and similar repositories for VCF-tricks
Users that are interested in VCF-tricks are comparing it to the libraries listed below
Sorting:
- Imputation pipeline for Open Humans☆14Feb 23, 2026Updated last week
- Analysis pipeline to model tumour clonal evolution from WGS data (driver annotation, quality control of copy number calls, subclonal and …☆20Feb 18, 2026Updated 2 weeks ago
- a modified version of FunSeq2 using new data context☆15Aug 18, 2022Updated 3 years ago
- A bioinformatics best-practice analysis pipeline for the analysis of shallow whole genome sequencing (sWGS) data for the identification o…☆14Updated this week
- A standard library for biological research.☆32Sep 2, 2025Updated 6 months ago
- Tip and tricks for BAM files☆86Aug 3, 2018Updated 7 years ago
- A small repo for storing the code for making the files and html for CCRs.☆22Oct 22, 2019Updated 6 years ago
- Concordance and contamination estimator for tumor–normal pairs☆59Oct 22, 2024Updated last year
- Genomes on the Cloud, Mapping & Variant Calling Pipelines☆33Mar 24, 2017Updated 8 years ago
- Late nights, long commits, quiet focus. A colorscheme for performance.☆14Jan 18, 2026Updated last month
- List of gene lists for genomic analyses.☆226Jun 24, 2022Updated 3 years ago
- Implementation of gene-level rare coding variant association tests targeting allelic series: cases where increasingly deleterious mutatio…☆14Oct 22, 2025Updated 4 months ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆12Sep 3, 2019Updated 6 years ago
- ☆10Jan 31, 2022Updated 4 years ago
- Filters for Next Generation Sequencing☆12Oct 31, 2024Updated last year
- Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data☆13Apr 18, 2019Updated 6 years ago
- LAAVA: Long-read AAV Analysis☆13Dec 9, 2025Updated 2 months ago
- Systematic Multi-Trait AAV Capsid Engineering for Efficient Gene Delivery (Eid et al., Nature Communications, 2024)☆11Aug 26, 2024Updated last year
- A GA4GH Draft Beacon implementation☆11Oct 23, 2015Updated 10 years ago
- Alignment workflow for Kids-First DRC☆11Feb 12, 2026Updated 3 weeks ago
- A library of code snippets used in Latch SDK development☆11Mar 21, 2023Updated 2 years ago
- Scripts in R for Landscape Genomics Analyses v.2☆10Feb 17, 2023Updated 3 years ago
- R interface to 'Gos'☆39Feb 23, 2023Updated 3 years ago
- Hail helper functions for the gnomAD project and Translational Genomics Group☆100Feb 20, 2026Updated last week
- A beautiful, vibrant Neovim colorscheme inspired by spring blossoms with a soft, dreamy aesthetic.☆21Jan 5, 2026Updated 2 months ago
- A repository on resources about Mendelian Randomization☆10Jul 9, 2018Updated 7 years ago
- Create satisficing tables in R.☆17Jan 21, 2026Updated last month
- ☆13Aug 30, 2024Updated last year
- A mapper for 10x-flex single cell sequencing reads with fixed abstract geometries☆38Feb 12, 2026Updated 3 weeks ago
- Lazy TUI to handle chezmoi dotfiles☆13Feb 1, 2025Updated last year
- ActiveDriverDB☆12May 1, 2023Updated 2 years ago
- ☆12Jan 19, 2024Updated 2 years ago
- an app for storing and calculating with arbitrary structures of values.☆11Dec 25, 2017Updated 8 years ago
- An R package to convert SingeCellExperiment and Seurat objects into anndata as comprehensively as possible.☆11Apr 23, 2025Updated 10 months ago
- Exercises for training scientists to perform some RNA-seq analyses.☆11Oct 7, 2019Updated 6 years ago
- Use cloud technology to annotate human sequence variants in parallel.☆11Jun 4, 2021Updated 4 years ago
- ☆11Jul 13, 2018Updated 7 years ago
- Motif Transformers for Predicting Protein-Protein Interactions Between a Novel Virus and Humans☆10Dec 4, 2024Updated last year
- ☆10Jul 23, 2020Updated 5 years ago