SynBioDex / pySBOL2Links
A pure Python implementation of the SBOL standard.
☆22Updated 6 months ago
Alternatives and similar repositories for pySBOL2
Users that are interested in pySBOL2 are comparing it to the libraries listed below
Sorting:
- Simple cloning simulator (Golden Gate etc.) for single and combinatorial assemblies☆62Updated 3 months ago
- 🤖 Python biolab automation library: parsers, report generators, picklist simulators, and more☆45Updated 3 months ago
- A python wrapper for the benchling api☆50Updated 4 years ago
- Find common blocks and differences between DNA sequences☆42Updated 4 months ago
- DNA overhang misannealing data for Python☆13Updated 3 months ago
- Software tool for the flexible design of pegRNAs and ngRNAs for prime editing!☆25Updated 3 years ago
- A route planner for DNA assembly☆35Updated 3 months ago
- iCodon customizes gene expression based on the codon composition☆15Updated last year
- Codon usage tables in code-friendly format + Python bindings☆38Updated 3 months ago
- Nanopore Plasmid Sequencing☆33Updated last year
- repository-based plasmid design☆29Updated 2 years ago
- nucleic acid folding☆101Updated 2 weeks ago
- A BioJS viewer for protein sequence features☆51Updated 2 years ago
- A PCR primer tool for DNA assembly flows☆33Updated last year
- Tool for deep mutational scanning experiments.☆54Updated 5 months ago
- Python Implementation of Codon Adaption Index☆37Updated 2 years ago
- An RNA manipulation library.☆57Updated last year
- Just a collection of (often poor) scripts to do various bits of bioinformatics stuff I find myself needing to do.☆60Updated 4 years ago
- Parsing tools for GTF (gene transfer format) files☆121Updated 6 months ago
- Read DNA sequences from colourful Microsoft Word documents☆34Updated 3 months ago
- Create force-directed graphs of RNA secondary structures.☆105Updated 5 years ago
- Python library for primer-based verification of DNA assemblies: primer selection, data analyis, etc.☆33Updated 4 months ago
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆74Updated last month
- sangerseq_viewer is a python package to automatically visualize Sanger sequencing results and the corresponding annotated sequence map.☆36Updated last year
- A high-fidelity E. coli RNA-seq compendium☆32Updated 4 years ago
- ☆22Updated 5 years ago
- An ultrafast and versatile algorithm that searches for potential off-target sites of CRISPR/Cas-derived RNA-guided endonucleases.☆93Updated 2 years ago
- RNA structure probing and post-transcriptional modifications mapping high-throughput data analysis☆40Updated last month
- Code for the CRISPOR article, all data and code to create figures and analysis☆43Updated 9 years ago
- G4Hunter (2012_2015)- IECB - Bordeaux☆15Updated 5 years ago