haddocking / arctic3dLinks
Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information
☆32Updated this week
Alternatives and similar repositories for arctic3d
Users that are interested in arctic3d are comparing it to the libraries listed below
Sorting:
- Modelling protein conformational landscape with Alphafold☆54Updated 3 months ago
- Scores for Hydrophobicity and Charges based on SASAs☆40Updated 5 months ago
- Some scripts that I keep using over and over.☆21Updated 5 months ago
- Boltzmann-ranked alternative protein conformations from reduced-MSA AlphaFold2☆58Updated last week
- ☆71Updated 8 months ago
- Novel estimator for the change in stability upon point mutation in monomeric and multimeric proteins.☆57Updated 6 months ago
- Data sharing for High-throughput Prediction of Changes in Protein Conformational Distributions with Subsampled AlphaFold2☆41Updated last year
- A Unified Approach to Protein Engineering☆42Updated last year
- Structure prediction of alternative protein conformations☆80Updated 9 months ago
- This repository provides with custom code and analysis scripts to generate structural ensembles of intrinsically disordered proteins by u…☆18Updated last month
- DiffDock implementation that adds support for HPC execution using Slurm and Singularity☆26Updated 6 months ago
- scripts to find PBD structures for cancer driver proteins☆31Updated last week
- ☆37Updated 2 years ago
- Structure prediction and design of proteins with noncanonical amino acids☆112Updated last week
- ☆51Updated last year
- Clusters protein chains based on CA distance difference☆16Updated 10 months ago
- Python package for the analysis of natural and modified peptides using a set of modules to study their sequences☆43Updated last week
- Updated Protpardelle models with more robust motif scaffolding and multichain support☆50Updated last week
- ☆36Updated last year
- Modelling of Large Protein Complexes☆38Updated 3 months ago
- De novo design of small molecule binding sites into proteins☆12Updated 4 years ago
- Extension of ThermoMPNN for double mutant predictions☆49Updated last month
- Binding pocket optimization based on force fields and docking scoring functions☆37Updated 8 months ago
- ☆52Updated last week
- Explicit crosslinks in AlphaFold 3☆23Updated 8 months ago
- ☆15Updated 2 months ago
- development repository for PyInteraph2☆22Updated 8 months ago
- ☆46Updated last year
- A Memetic Algorithm boosts accuracy and speed of all-atom protein-protein docking☆29Updated 5 months ago
- FeatureDock is a protein-ligand docking software guided by physicochemical feature-based local environment learning using Transformer☆37Updated last year