A deep learning framework for deubiquitnase-substrate interaction identification
☆13Jul 31, 2025Updated last year
Alternatives and similar repositories for TransDSI
Users that are interested in TransDSI are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Multilevel Attention Network with Semi-supervised Domain Adaptation for Drug-Target Prediction☆10Apr 16, 2024Updated 2 years ago
- Accurate prediction of drug–target interactions in drug discovery.☆11Dec 9, 2025Updated 10 months ago
- ☆10May 31, 2026Updated 5 months ago
- ☆10Jun 28, 2025Updated last year
- Deep transformer for predicting interchain residue-residue distances of protein complexes☆14Mar 19, 2024Updated 2 years ago
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Fragment binding prediction with ColabFold☆47Oct 16, 2026Updated 2 weeks ago
- ☆17Dec 10, 2024Updated last year
- Open-source docking pipeline leveraging pairwise statistics☆16Jul 26, 2024Updated 2 years ago
- ColabFold protocol☆62Oct 17, 2024Updated 2 years ago
- This is the official implementation of the paper "A Deep Learning Approach for Rational Ligand Generation with Property Control via React…☆21Sep 28, 2024Updated 2 years ago
- FlexPose, a framework for AI-based flexible modeling of protein-ligand binding pose.☆56Dec 27, 2023Updated 2 years ago
- pytorch implementation of trDesign☆45Mar 19, 2021Updated 5 years ago
- Github for the TOPCONS2☆17Updated this week
- Input files and binding free energy values from our benchmark with QuantumBind-RBFE☆19Apr 16, 2025Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆17Feb 20, 2025Updated last year
- DeepDom is an ab-initio method for protein domain boundary prediction☆16Sep 5, 2022Updated 4 years ago
- ☆21Jul 16, 2020Updated 6 years ago
- GPT-based protein language model for PTM site prediction☆21Aug 11, 2024Updated 2 years ago
- ☆19Dec 23, 2024Updated last year
- ☆87Jan 8, 2024Updated 2 years ago
- Epitope Prediction Pipeline and analysis tools built around AlphaFold 2☆21May 9, 2024Updated 2 years ago
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Sep 18, 2023Updated 3 years ago
- Structure-aware PRotein ligand INTeraction (SPRINT) is a ultrafast deep learning framework for drug-target interaction prediction.☆22Updated this week
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- A plugin with utilities to make your TypeScript-like docs JSDoc valid☆13Dec 7, 2025Updated 10 months ago
- All-atom generative protein design using SE(3) flow matching☆28Feb 3, 2026Updated 9 months ago
- Codebase of the paper "Str2Str: A Score-based Framework for Zero-shot Protein Conformation Sampling" (ICLR 2024)☆90Apr 21, 2026Updated 6 months ago
- ☆70Oct 11, 2022Updated 4 years ago
- A Spatial-temporal Gated Attention Module for Molecular Property Prediction Based on Molecular Geometry☆32Apr 17, 2021Updated 5 years ago
- OPUS-Fold: An Open-Source Protein Folding Framework Based on Torsion-Angle Sampling☆21May 4, 2020Updated 6 years ago
- A structure checker in python☆27Nov 25, 2024Updated last year
- ☆52Aug 7, 2023Updated 3 years ago
- A disease-centric vision-language foundation model for precision oncology in kidney cancer.☆14Aug 1, 2026Updated 3 months ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Multi-target de novo molecular generator conditioned on AlphaFold's latent protein embeddings.☆83Mar 27, 2025Updated last year
- ☆25Mar 15, 2024Updated 2 years ago
- ☆22May 31, 2023Updated 3 years ago
- Source code of PETA: Evaluating the Impact of Protein Transfer Learning with Sub-word Tokenization on Downstream Applications.☆33May 16, 2025Updated last year
- Structure prediction of alternative protein conformations☆86Feb 24, 2025Updated last year
- ☆30Sep 8, 2024Updated 2 years ago
- Automatic Retrieval and ClusTering of Interfaces in Complexes from 3D structural information☆33Jul 28, 2026Updated 3 months ago