ccdmb / BioDendroLinks
A package to cluster and visualise MS/MS spectral data
☆11Updated 4 years ago
Alternatives and similar repositories for BioDendro
Users that are interested in BioDendro are comparing it to the libraries listed below
Sorting:
- ☆20Updated 2 years ago
- Python package for processing direct-infusion mass spectrometry-based metabolomics and lipidomics data☆20Updated 2 years ago
- Realtime quality control for mass spectrometry data acquisition☆16Updated 8 months ago
- Package to perform annotations of features from LC-MS All-ion fragmentation (AIF) metabolomics datasets☆12Updated 3 years ago
- ☆11Updated last year
- Python pipeline for metabolomics data preprocessing, QC, standardization and annotation☆15Updated 7 months ago
- The tools that constitute a nontargeted LCMS metabolomics data processing pipeline, created and used by the Broad Institute Metabolomics …☆13Updated last month
- ☆25Updated last year
- Dashboard for analysis of liquid chromatography (tandem) mass spectrometry data.☆32Updated 2 months ago
- Scalable and self-optimizing processing workflow for untargeted LC-MS☆28Updated 11 months ago
- Hierarchical orderings for mass spectrometry data. Canonically pronounced "chemis-tree".☆31Updated 2 years ago
- A Pipeline for LC-MS/MS Metabolomics Data Process and Analysis☆13Updated this week
- Untargeted metabolomics workflow for data processing and analysis written in Jupyter notebooks (Python)☆22Updated 8 months ago
- pathway and network analysis for metabolomics☆41Updated last year
- Untargeted metabolomics workflow for large-scale data processing and analysis implemented in Snakemake☆27Updated 6 months ago
- A workflow for metabolite identification and accurate profiling in multidimensional LC-IM-MS-DIA measurements. DOI: 10.5281/zenodo.☆16Updated 2 years ago
- GLEAMS is a Learned Embedding for Annotating Mass Spectra.☆25Updated last year
- HUMOS is a web application aimed to help teaching Orbitrap mass spectrometry. HUMOS models a mass spectrum of a peptide mixture allowing …☆11Updated 4 months ago
- Molecular formula discovery via bottom-up MS/MS interrogation☆13Updated 10 months ago
- A set of metabolomics tools for use in Galaxy☆11Updated 2 years ago
- IsoCor: Isotope Correction for mass spectrometry labeling experiments☆24Updated 2 months ago
- metabolite identification R-package for metabolomic high-resolution LC-MS datasets.☆15Updated 8 years ago
- MS2Query - machine learning assisted library querying of MS/MS spectra☆45Updated last month
- Core Utils for Mass Spectrometry Data☆17Updated 3 months ago
- Metabolomics software for database-assisted deconvolution of MS/MS spectra☆19Updated last year
- Core utilities for metabolomics.☆9Updated 2 months ago
- A Bioconductor R package - Automated Evaluation of Precursor Ion Purity for Mass Spectrometry Based Fragmentation in Metabolomics☆16Updated last year
- ☆15Updated 3 years ago
- Maven GUI: Metabolomics Analysis and Visualization Engine☆20Updated 2 weeks ago
- Metabolome Annotation Workflow☆25Updated last year