statgen / verifyBamIDLinks
☆27Updated 8 years ago
Alternatives and similar repositories for verifyBamID
Users that are interested in verifyBamID are comparing it to the libraries listed below
Sorting:
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 5 months ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated 11 months ago
- ☆37Updated 4 years ago
- v2.x of the microassembly based somatic variant caller☆24Updated last month
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆39Updated 2 years ago
- Remove primer sequence from BAM alignments by soft-clipping☆31Updated 5 years ago
- Prioritize structural variants based on CADD scores☆29Updated 5 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆35Updated 2 years ago
- A method to identify structural variation from sequencing data in target regions☆32Updated 4 years ago
- Simplify snpEff annotations for interesting cases☆22Updated 6 years ago
- filtering trio-based genetic variants in VCFs for clinical review☆21Updated 4 years ago
- Genomic VCF to tab-separated values☆47Updated 2 years ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- FermiKit small variant calls for public SGDP samples☆17Updated 8 years ago
- picking up low allelic-fraction, somatic variants from tumor samples☆14Updated 7 years ago
- Accurate, Lightweight Clustering of de novo Transcriptomes using Fragment Equivalence Classes☆31Updated last year
- Preprocessing tools for unique molecular index (UMI) sequencing reads☆31Updated 2 years ago
- Integrated Variant Caller☆17Updated 7 years ago
- PopSTR - A Population based microsatellite genotyper☆33Updated last year
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 3 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- CLAMMS is a scalable tool for detecting common and rare copy number variants from whole-exome sequencing data.☆29Updated 4 years ago
- Tools for bam file processing☆55Updated 10 years ago
- ☆21Updated this week
- A set of tools to annotate VCF files with expression and readcount data☆29Updated 4 months ago
- a pileup library that embraces the huge☆43Updated 4 years ago
- ☆25Updated 6 years ago
- Graphite - Graph-based variant adjudication☆28Updated 4 years ago