statgen / verifyBamID
☆26Updated 8 years ago
Alternatives and similar repositories for verifyBamID:
Users that are interested in verifyBamID are comparing it to the libraries listed below
- Calib clusters barcode tagged paired-end reads based on their barcode and sequence similarity.☆38Updated last year
- BigWig manpulation tools using libBigWig and htslib☆29Updated 8 months ago
- picking up low allelic-fraction, somatic variants from tumor samples☆14Updated 7 years ago
- Prioritize structural variants based on CADD scores☆29Updated 4 years ago
- Ximmer is a system for CNV calling on exome and targeted genomic sequencing☆19Updated 2 months ago
- Simultaneous detection of SNPs and Indels using a 16-genotype probabilistic model☆27Updated last year
- Personal diploid genome creation and coordinate conversion☆25Updated 3 weeks ago
- a Shiny/R application to view and annotate copy number variations☆27Updated 2 years ago
- Stupid Simple Structural Variant View☆25Updated 8 years ago
- FermiKit small variant calls for public SGDP samples☆17Updated 8 years ago
- BreakSeq2: Ultrafast and accurate nucleotide-resolution analysis of structural variants☆24Updated 9 years ago
- Structural variation and indel detection using rolling local string graph assembly☆9Updated 8 years ago
- Validation runs using bcbio: germline, somatic, structural variant calling and RNA-seq analyses☆31Updated 3 years ago
- Tools for bam file processing☆55Updated 10 years ago
- program for haplotype phasing from sequence reads and related tools☆25Updated 6 years ago
- Integrated Variant Caller☆17Updated 7 years ago
- Structural Variation and fusion detection using targeted sequencing data from circulating cell free DNA☆27Updated 10 months ago
- A set of tools to annotate VCF files with expression and readcount data☆29Updated last month
- Benchmark pipeline for Structural Variation analyses, funded by the ALLBio.☆24Updated 10 years ago
- Fast, accurate and simple to use command line tool for variant detection in NGS data.☆10Updated 5 years ago
- A Framework to call Structural Variants from NGS based datasets☆22Updated 7 years ago
- GARFIELD-NGS: Genomic vARiants FIltering by dEep Learning moDels in NGS☆17Updated 6 years ago
- sort genomic data☆35Updated 4 years ago
- full taxonomer cython repository☆22Updated 5 years ago
- ☆21Updated 2 weeks ago
- Specific Transposable Element Aligner (HERV-K)☆16Updated 5 years ago
- Exploration of controlled loss of quality values for compressing CRAM files☆34Updated 2 years ago
- Filtering and profiling of next-generational sequencing data using region-specific rules☆25Updated 8 years ago
- Multi-sample genome coverage viewer to observe large, coverage-based anomalies alongside annotations and sample metadata☆56Updated 3 years ago
- ☆23Updated 5 years ago