Griffan / VerifyBamID
VerifyBamID2: A robust tool for DNA contamination estimation from sequence reads using ancestry-agnostic method.
☆97Updated 11 months ago
Alternatives and similar repositories for VerifyBamID:
Users that are interested in VerifyBamID are comparing it to the libraries listed below
- Tools for the analysis of structural variation in genomes☆79Updated last year
- Tools for processing and analyzing structural variants.☆151Updated 3 years ago
- Bayesian genotyper for structural variants☆131Updated 4 years ago
- phasing and Allele Specific Expression from RNA-seq☆114Updated 9 months ago
- Graph realignment tools for structural variants☆156Updated 2 years ago
- ABRA2☆92Updated 2 years ago
- Jasmine: SV Merging Across Samples☆211Updated 4 months ago
- A tool for profiling long STRs from short reads☆97Updated 4 years ago
- Stratification BED files from the Global Alliance for Genomics and Health (GA4GH) Benchmarking Team and the Genome in a Bottle Consortium…☆79Updated 2 years ago
- don't get DUP'ed or DEL'ed by your putative SVs.☆105Updated 4 years ago
- Robust detection of clinically relevant structural and copy number variation from whole genome sequencing data☆69Updated 8 months ago
- A tool for somatic structural variant calling using long reads☆128Updated last week
- Somatic and germline variant caller for amplicon data. Recommended caller for tumor-only workflows.☆98Updated 2 years ago
- R package designed to simplify structural variant analysis☆72Updated 3 years ago
- Structural variation and indel detection by local assembly☆245Updated last month
- Control-FREEC: Copy number and genotype annotation in whole genome and whole exome sequencing data☆159Updated 8 months ago
- This repository contains information about latest release from Genome in a Bottle project☆74Updated 5 years ago
- software tools for haplotype assembly from sequence data☆217Updated 2 months ago
- BAM Statistics, Feature Counting and Annotation☆149Updated 2 months ago
- SV caller for nanopore data☆91Updated 4 years ago
- pbsv - PacBio structural variant (SV) calling and analysis tools☆145Updated 2 months ago
- ☆82Updated 6 years ago
- Phased assembly variant caller☆112Updated 5 months ago
- Data and information about the Polaris study☆53Updated 5 years ago
- Microassembly based somatic variant caller for NGS data☆154Updated 2 years ago
- Runs a combination of tools to generate structural variant calls on whole-genome sequencing data☆101Updated 4 years ago
- Pipeline for calling structural variations in whole genomes sequencing Oxford Nanopore data☆114Updated 3 years ago
- Scalable gVCF merging and joint variant calling for population sequencing projects☆158Updated last year
- Toolkit for calling structural variants using short or long reads☆103Updated 2 weeks ago
- A tool to identify, orient, trim and rescue full length cDNA reads☆81Updated 2 years ago