Collection of papers related to BCR repertoire analyses
☆20Jan 21, 2022Updated 4 years ago
Alternatives and similar repositories for bcr-repertoire-papers
Users that are interested in bcr-repertoire-papers are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PyTorch implementation of Parapred (Liberis et al., 2018) with Paratyping (Richardson et al., 2021)☆20Aug 20, 2023Updated 3 years ago
- Tools for Adaptive Immune Receptor Sequence-Based Machine and Deep Learning☆14Aug 22, 2026Updated 2 weeks ago
- Antibody-Specific Epitope Mapping☆19Sep 10, 2025Updated 11 months ago
- 📚 Tools and databases for analyzing HLA and VDJ genes.☆243Feb 12, 2026Updated 6 months ago
- Public repository describing training and testing of AntiBERTa.☆66Apr 14, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Sapiens is a human antibody language model based on BERT.☆80Jan 22, 2026Updated 7 months ago
- ☆31Aug 26, 2025Updated last year
- High-throughput mapping and domain partitioning of antigen receptor sequences☆56Aug 15, 2026Updated 3 weeks ago
- Machine learning-driven antibody design☆64Jul 5, 2023Updated 3 years ago
- p-IgGen: A Generative Paired Antibody Language Model☆13May 6, 2025Updated last year
- Code repo for all analysis done for the 'Pan-cancer whole genome comparison of primary and metastatic solid tumors' study.☆17May 11, 2023Updated 3 years ago
- B-cell and T-cell Adaptive Immune Receptor Repertoire (AIRR) sequencing analysis pipeline using the Immcantation framework☆81Aug 28, 2026Updated last week
- ImReP is a computational method for rapid and accurate profiling of the adaptive immune repertoire from regular RNA-Seq data.☆29Oct 11, 2019Updated 6 years ago
- ☆17Dec 10, 2025Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- ☆12Sep 20, 2019Updated 6 years ago
- Python package simulating artificial selection on microbial communities☆15Aug 15, 2023Updated 3 years ago
- ☆21Mar 20, 2024Updated 2 years ago
- Summary statistics for repertoires☆17Feb 1, 2023Updated 3 years ago
- ☆15Sep 18, 2018Updated 7 years ago
- Machine learning models for antibody sequences in PyTorch☆41May 25, 2021Updated 5 years ago
- scMatch: a single-cell gene expression profile annotation tool using reference datasets☆21Aug 11, 2020Updated 6 years ago
- imNet: a Sequence Network Construction Toolkit☆20Jul 7, 2020Updated 6 years ago
- Meta learning addresses noisy and under-labeled data in machine learning-guided antibody engineering (https://doi.org/10.1016/j.cels.2023…☆23Aug 8, 2024Updated 2 years ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- ☆20Dec 9, 2021Updated 4 years ago
- ☆15Jun 1, 2023Updated 3 years ago
- Trans-association between HLA and TCR-CDR3☆19Mar 29, 2023Updated 3 years ago
- Tools for describing and manipulating demographic models.☆18Aug 4, 2026Updated last month
- Correlation-based approach for identification of endocrine interactions☆13Jan 18, 2022Updated 4 years ago
- This package implements the Ensemble of Gene Set Enrichment Analyses (EGSEA) method for gene set testing.☆11Jan 21, 2024Updated 2 years ago
- Teaching materials for 6-7th March 2018 delivery of introductory bioinformatics training course for IBioIC.☆20Mar 12, 2018Updated 8 years ago
- ☆16Nov 5, 2021Updated 4 years ago
- QBRC Neoantigen calling pipeline with CSiN calculation embedded☆26Feb 8, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- docking visualization with py3dmol and streamlit☆25Mar 15, 2021Updated 5 years ago
- Signaling Pathway Visualizer☆10Jun 22, 2019Updated 7 years ago
- Tutorial about noisy labels for SIBGRAPI 2020☆11Nov 6, 2020Updated 5 years ago
- nosqlapi is a library for building standard NOSQL python libraries.☆12Apr 5, 2022Updated 4 years ago
- ☆18Apr 6, 2023Updated 3 years ago
- BraCeR - reconstruction of B cell receptor sequences from single-cell RNAseq data☆43Oct 15, 2025Updated 10 months ago
- An awesome list of resources for reproducible research in R. Includes a table of comparison for different tools.☆17Dec 21, 2024Updated last year