sib-swiss / 2017-10-longreads-trainingLinks
☆9Updated 7 years ago
Alternatives and similar repositories for 2017-10-longreads-training
Users that are interested in 2017-10-longreads-training are comparing it to the libraries listed below
Sorting:
- Evolutionary Transcriptomics with R☆45Updated this week
- A set of workflows written in Nextflow for Genome Annotation.☆45Updated last year
- ☆10Updated 4 years ago
- Rank-based Gene Ontology analysis of gene expression data☆42Updated 2 years ago
- Pipeline to take VCF through to Selection Analysis.☆58Updated 2 years ago
- Repository of common bioinformatics scripts☆39Updated 3 years ago
- Transposable element polymorphism identification☆33Updated 5 years ago
- EM based transcript abundance from nanopore reads mapped to a transcriptome with minimap2☆61Updated 9 months ago
- Building SuperTranscripts: A linear representation of transcriptome data☆67Updated 4 years ago
- An efficient way to guess the library type of your RNA-Seq data.☆31Updated 2 years ago
- GFF3sort: A Perl Script to sort gff3 files and produce suitable results for tabix tools☆50Updated 5 years ago
- An R package for estimating poly(A)-tail lengths in Oxford Nanopore RNA and DNA reads.☆54Updated 9 months ago
- Tools for working with second gen assemblies, fasta sequences, etc☆93Updated 8 years ago
- DensityMap is perl tool for the visualization of features density along chromosomes☆18Updated 3 years ago
- A snakemake pipeline for SV analysis from nanopore genome sequencing☆51Updated 5 years ago
- Analysis of TE contribution to features (transcripts or simple features). Includes utils to test enrichment.☆27Updated 5 years ago
- A collection of command line tools for working with sequencing data☆51Updated last month
- UNDER DEVELOPMENT--- Analysis of long non-coding RNAs from RNA-seq datasets☆34Updated 4 months ago
- My collection of light bioinformatics analysis pipelines for specific tasks☆75Updated last year
- A catalogue of available long read sequencing data analysis tools☆78Updated 5 months ago
- Adapters for trimming☆30Updated 6 years ago
- Calculate GC% and GC deviation for circular genomes☆17Updated 5 years ago
- web documentation for Trinotate☆48Updated 2 years ago
- De novo annotation of young retrotransposons☆48Updated 3 years ago
- Quickly calculate and visualize sequence coverage in alignment files☆99Updated 6 years ago
- A range of different perl scripts for manipulating sequences, conducting alignments, consensus sequences, changing formats☆29Updated last year
- Software for clustering de novo assembled transcripts and counting overlapping reads☆72Updated 3 years ago
- Genome Annotation Without Nightmares☆46Updated 6 months ago
- BamDeal: a comprehensive toolkit for bam manipulation☆54Updated 2 years ago
- NGSNGS: Next generation simulator for next generation sequencing data☆53Updated 8 months ago