shuojiao / Community-assembly-processes-and-species-coexistences-of-agricultural-soils-microbiomeLinks
☆21Updated 5 years ago
Alternatives and similar repositories for Community-assembly-processes-and-species-coexistences-of-agricultural-soils-microbiome
Users that are interested in Community-assembly-processes-and-species-coexistences-of-agricultural-soils-microbiome are comparing it to the libraries listed below
Sorting:
- Computer code for the manuscript "Climate Warming Enhances Microbial Network Complexity and Stability"☆50Updated 3 years ago
- Infer Community Assembly Mechanisms by Phylogenetic bin-based null model analysis (Version 1)☆86Updated 7 months ago
- Microbial ecological network visualization clustering☆126Updated 6 months ago
- An R package for data analysis in microbial community ecology☆244Updated this week
- Data and scripts for amplicon pipeline☆26Updated 6 years ago
- ☆13Updated 4 years ago
- R package for microbiome biomarker discovery☆189Updated 7 months ago
- Make Picrust2 Output Analysis and Visualization Easier☆156Updated this week
- Fast expectation maximization for microbial source tracking☆129Updated last year
- FUNGuild: parsing OTUs into functional guilds☆120Updated last year
- Repo for a Microbiome Protocol☆10Updated 7 years ago
- Normalized Stochasticity Ratio in community assembly☆28Updated 10 months ago
- Various functions for analysis of microbial community data☆45Updated 2 years ago
- Code for running analyses carried out in Stegen et al. 2013, ISME☆30Updated 7 years ago
- Statistics and visualization for amplicon data☆71Updated 2 years ago
- MJOLNIR Metabarcoding Joining Obitools & Linkage Networks In R☆18Updated 2 weeks ago
- ☆12Updated last year
- This is an R package for element cycle analysis using metagenomic data.☆37Updated 2 months ago
- Analysis code for a manuscript on community similarity computation☆14Updated 6 years ago
- Network construction, analysis, and comparison for microbial compositional data☆170Updated 5 months ago
- Sparse InversE Covariance estimation for Ecological Association and Statistical Inference☆214Updated last month
- R scripts for performing co-occurrence analyses☆34Updated 10 years ago
- BIO9905MERG1 – Bioinformatics for Environmental Sequencing (DNA metabarcoding)☆10Updated 2 years ago
- A comprehensive R package for deep mining microbiome☆190Updated 2 months ago
- ☆23Updated 6 years ago
- Helper Functions for Interactive Tree Of Life (iTOL)☆173Updated this week
- Utilities for community ecology analysis☆19Updated 4 years ago
- Integrated Network Analysis Pipeline☆18Updated 9 months ago
- Import qiime2 artifacts to R☆173Updated 9 months ago
- microbiome R package☆306Updated last month