Code for processing and analyzing the automated reconstruction of the Lee lab's Female Adult Nerve Cord EM dataset
☆15May 6, 2026Updated last month
Alternatives and similar repositories for FANC_auto_recon
Users that are interested in FANC_auto_recon are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Information and python tools for the GridTape-TEM dataset of an adult female fly's Brain And Nerve Cord☆21May 16, 2026Updated last month
- Annotations for the FlyWire dataset.☆47May 4, 2026Updated 2 months ago
- This is the python client for accessing REST APIs within the Connectome Annotation Versioning Engine.☆37Jun 18, 2026Updated 2 weeks ago
- ☆13Jun 17, 2026Updated 2 weeks ago
- Tools to work with the FlyWire connectome. Fully interoperable with navis.☆24May 21, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- A deep learning based method to uncover brain learning rules from behavior or neural experimental data.☆18Dec 18, 2024Updated last year
- ☆43Sep 1, 2025Updated 10 months ago
- Python SDK for interacting with the BossDB REST API☆23Apr 18, 2025Updated last year
- Python library for analysis of neuroanatomical data.☆115Updated this week
- Asynchronous serverless task queue with timed leasing of tasks. Threaded implementations for SQS and local filesystem.☆39Jul 2, 2025Updated last year
- WebGL-based viewer for volumetric data☆25Jun 12, 2026Updated 3 weeks ago
- jupyter notebook extension to visualize numpy arrays with the neuroglancer☆28Aug 28, 2018Updated 7 years ago
- A connectome-constrained deep mechanistic network (DMN) model of the fruit fly visual system in PyTorch.☆122Mar 26, 2026Updated 3 months ago
- Python client utilties for interacting with the neuPrint connectome analysis service☆38May 23, 2026Updated last month
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Generates neuroscience videos from high-level descriptions using Blender or VVDViewer.☆35Mar 22, 2026Updated 3 months ago
- Unsupervised Instance Segmentation in Microscopy☆27Apr 3, 2024Updated 2 years ago
- Toolkit for the generation and analysis of volume eletron microscopy based synaptic connectomes of brain tissue.☆45Jul 28, 2025Updated 11 months ago
- Masked variational autoencoders for modeling conditional distributions of neural and behavioral data☆11Feb 24, 2025Updated last year
- Read and write Neuroglancer datasets programmatically.☆174Jun 4, 2026Updated last month
- Serialize dict of integers to bytes and read with near zero parsing. Specialization for int to int.☆10Jun 26, 2026Updated last week
- scripts for using spark on janelia's cluster☆12Nov 12, 2023Updated 2 years ago
- Using color jitter to distinguish individuals in categorically colored visualizations☆11Apr 17, 2024Updated 2 years ago
- ☆10Jun 26, 2026Updated last week
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- An interactive computing platform for studying the function of executable circuits constructed from fly brain data.☆49Sep 29, 2025Updated 9 months ago
- Human cortical organoid/spheroid intelligence system☆15Jun 27, 2024Updated 2 years ago
- A Python package for feature extraction of neural morphologies☆48Oct 20, 2025Updated 8 months ago
- PyTorch Connectomics: segmentation toolbox for EM connectomics☆195Jun 26, 2026Updated last week
- Cookiecutter for snakemake slurm profile☆16Jul 22, 2023Updated 2 years ago
- ☆43Jul 23, 2024Updated last year
- Multiplatform 3D numpy image browser based viewer with voxel painting.☆16Apr 21, 2026Updated 2 months ago
- GUI to compute and explore receptive fields, primarily from calcium imaging recordings☆13Jun 26, 2021Updated 5 years ago
- BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.☆20May 21, 2026Updated last month
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- stcli - a repl command line crypto wallet for stellar that is simple and all in one python file☆16May 23, 2023Updated 3 years ago
- Mix-and-match computer vision tools for your animal behaviour analysis☆29Jun 1, 2026Updated last month
- A generalized model fitting pipeline that houses models, trainers, and datasets in datajoint and returns as well as stores trained models…☆20Apr 9, 2024Updated 2 years ago
- Python TIFF Stack Reader for ScanImage 5 scans (including multiROI).☆13May 2, 2022Updated 4 years ago
- Performance benchmarks of Zarr V3 implementations☆20Feb 8, 2026Updated 4 months ago
- A set of tools to assist in aligning (registering) large numbers of EM images into a coherent image volume in two and three dimensions.☆16Apr 13, 2019Updated 7 years ago
- Configurable acquisition from multiple FLIR/Point Grey camera using Bonsai and Python to h264 compress the video on the GPU.☆16Mar 7, 2025Updated last year