Quorumetrix / Blender_scriptsLinks
☆15Updated last year
Alternatives and similar repositories for Blender_scripts
Users that are interested in Blender_scripts are comparing it to the libraries listed below
Sorting:
- A python package which aligns histology to the Allen Brain Atlas and Waxholm rat atlas using deep learning.☆113Updated 5 months ago
- Repo for CCN workshop on caiman and mesmerize in January 2023☆13Updated 2 years ago
- ☆34Updated 8 months ago
- ☆46Updated 5 years ago
- ImageJ Plugin for Flexible Atlas Segmentation Tool for Multi-Area Processing☆24Updated 3 years ago
- Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.☆26Updated 2 years ago
- brainglobe.info website☆13Updated this week
- Registration to BrainGlobe atlases in napari using Elastix☆29Updated this week
- QC and cell type assignment for patch-seq transcriptomics data☆24Updated last year
- A table containing imaging analysis tools for biology, with a focus on calcium imaging.☆57Updated 2 years ago
- UCLA Multiphoton Miniature Microscope☆16Updated 8 months ago
- A napari plugin to render BrainGlobe atlases and associated data as layers.☆23Updated this week
- ☆52Updated last year
- A Python interface to access neuroanatomical atlases☆170Updated last week
- High level pandas-based API for batch analysis of Calcium Imaging data using CaImAn☆70Updated last week
- ☆18Updated 3 years ago
- Analysis code for Easy Electrophysiology (www.easyelectrophysiology.com)☆17Updated 10 months ago
- Platform for Calcium Imaging analysis. DEPRECATED.☆62Updated 2 years ago
- Histology processing☆72Updated last month
- An event-based tool for analyzing and quantifying calcium or neurotransmitter imaging data☆55Updated last year
- ClearMap is a python toolbox for the analysis and registration of volumetric data from cleared tissues.☆53Updated 5 years ago
- R package for segmentation, registration and generating web-based brain atlases from microscope images☆93Updated 4 years ago
- GPU-based 3D non-rigid volumetric registration☆43Updated 5 months ago
- Tools for distributed alignment of massive images☆92Updated this week
- Automated 3D brain registration with support for multiple species and atlases.☆143Updated this week
- Calcium imaging inter-session alignment☆15Updated last month
- A napari plugin for direct 3D cell segmentation -- taking you through training, inference, and review of masks☆114Updated 3 months ago
- BIRDS plug-in on Fiji and attached jar package☆21Updated 4 years ago
- Activity Quantification and Analysis for molecular spatiotemporal signals☆34Updated last month
- A 2D-3D histological brain slice registration application for mouse, rat, zebrafish brains.☆37Updated 2 years ago