☆24Aug 8, 2022Updated 4 years ago
Alternatives and similar repositories for t2t-variants
Users that are interested in t2t-variants are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Code associated with the manuscript "A complete reference genome improves analysis of human genetic variation".☆17Jan 17, 2023Updated 3 years ago
- Structural Variants Assessment Based on Haplotype-resolved Assemblies☆22Apr 28, 2023Updated 3 years ago
- PHasing Reads in Areas Of Homozygosity☆14Feb 12, 2025Updated last year
- Figures for the CHM13 T2T SD paper.☆12Sep 12, 2021Updated 5 years ago
- ☆14Oct 17, 2024Updated 2 years ago
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- The Vertebrate Genomes Project Mitogenome Assembly Pipeline☆19Mar 26, 2023Updated 3 years ago
- a simple lightweight workflow engine for data analysis scripting☆11Sep 5, 2019Updated 7 years ago
- Runs a combination of tools to generate structural variant calls on short-read whole-genome sequencing data☆22Nov 17, 2021Updated 4 years ago
- Tumor-normal variant calling workflow using HiFi reads☆31Mar 4, 2026Updated 7 months ago
- WDL workflows for variant calling and assembly using ONT☆40Oct 20, 2026Updated last week
- NHC: A computational approach to detect physiological homogeneity in the midst of genetic heterogeneity☆12Feb 25, 2026Updated 8 months ago
- Polygenetic Basis of Seedlessness in Grapevine (Vitis vinifera L.)☆10Mar 11, 2025Updated last year
- rust tool to choose the best read alignment between haploids to a diploid reference genome☆21Oct 20, 2026Updated last week
- VolcanoSV enables accurate and robust structural variant calling in diploid genomes from single-molecule long read sequencing☆10Sep 8, 2026Updated last month
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A variant caller for the GBA gene using WGS data☆23Jul 31, 2024Updated 2 years ago
- Westlake BioBank for Chinese pilot project☆10May 17, 2023Updated 3 years ago
- Genome haplotype assembly and assessment method☆12Nov 24, 2023Updated 2 years ago
- DEPRECATED - Workflow for the comprehensive detection and prioritization of variants in human genomes with PacBio HiFi reads☆38Sep 27, 2023Updated 3 years ago
- The pipelines were built in the project resolving the genome of a diploid potato. Most of the scripts were sepcially designed to perform …☆24Jul 4, 2023Updated 3 years ago
- Genotyping of STRs with long reads☆12Updated this week
- ☆31Oct 1, 2026Updated 3 weeks ago
- KaryoScope: rapid, alignment-free sequence annotation for the pangenome era☆29Oct 21, 2026Updated last week
- Vim syntax highlighting for WDL☆20Jul 28, 2021Updated 5 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- ☆12Feb 19, 2021Updated 5 years ago
- The complete sequence of a Chinese individual☆14Oct 8, 2024Updated 2 years ago
- Bash scripts and data used in pantranscriptomic paper☆25Oct 21, 2022Updated 4 years ago
- Reducing reference bias using multiple population reference genomes☆34May 27, 2024Updated 2 years ago
- Immuological gene typing and annotation for genome assembly☆42Mar 13, 2025Updated last year
- Kmer based genotyper for short reads.☆23Oct 19, 2021Updated 5 years ago
- ☆11Dec 18, 2025Updated 10 months ago
- Materials for Spring 2021 Applied Genomics Course☆54Apr 21, 2021Updated 5 years ago
- ☆16Jan 15, 2025Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- ☆14Feb 2, 2023Updated 3 years ago
- Structural variant (SV) analysis tools☆42Jul 1, 2024Updated 2 years ago
- A loose collection of scripts and utilities for processing and analyzing the Goat reference genome assembly☆11Feb 28, 2017Updated 9 years ago
- Python package for comparing genome assemblies and read data to the diploid Q100 benchmark☆21Oct 8, 2026Updated 3 weeks ago
- ☆14Oct 19, 2026Updated last week
- Code repository for the T2T-Y paper☆25Jul 11, 2023Updated 3 years ago
- Johns Hopkins University student-led genomics paper discussion group☆13Apr 19, 2020Updated 6 years ago