Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
☆21Feb 1, 2019Updated 7 years ago
Alternatives and similar repositories for mmtf-spark
Users that are interested in mmtf-spark are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Structural Bioinformatics Training Workshop & Hackathon 2017☆19Jan 23, 2018Updated 8 years ago
- Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.☆68Mar 27, 2023Updated 3 years ago
- Hackathon projects repository for MMTF Workshop 2018☆11Aug 30, 2018Updated 8 years ago
- Structural Bioinformatics Training Workshop & Hackathon 2018☆60May 17, 2022Updated 4 years ago
- The javascript implementation of the MMTF format.☆11Jun 26, 2017Updated 9 years ago
- Bare Metal GPUs on DigitalOcean Gradient AI • AdPurpose-built for serious AI teams training foundational models, running large-scale inference, and pushing the boundaries of what's possible.
- The java implementation of the MMTF API, decoder and encoder.☆14Dec 19, 2025Updated 10 months ago
- Code for the MSB publication: Exploring amino acid functions and positional subtypes in a deep mutational landscape☆10Jun 11, 2022Updated 4 years ago
- A collection of game AI☆10May 6, 2021Updated 5 years ago
- Methods for mapping proteomics data on 3D protein structure.☆15Jan 18, 2020Updated 6 years ago
- Machine learning experiments for CheckMyBlob☆14Jun 14, 2018Updated 8 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28May 17, 2022Updated 4 years ago
- Detect, analyze, and visualize protein symmetry☆33Dec 19, 2025Updated 10 months ago
- The python implementation of the MMTF API, decoder and encoder.☆45Jul 7, 2022Updated 4 years ago
- Evolutionary protein-protein interface classifier☆14Sep 20, 2026Updated last month
- Deploy on Railway without the complexity - Free Credits Offer • AdConnect your repo and Railway handles the rest with instant previews. Quickly provision container image services, databases, and storage volumes.
- 📦 A Command Line Tool for downloading protein structures, sequences and MSAs☆10Nov 21, 2017Updated 8 years ago
- 🔍 Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure data…☆11Oct 16, 2018Updated 8 years ago
- Macromolecular viewer for crystallographers (WebGL)☆44Apr 5, 2026Updated 6 months ago
- Firefox extension to dynamically theme browser windows based on a color palette☆11Mar 25, 2026Updated 7 months ago
- Python module to manipulate and visualize minimap2's cs tag☆11Sep 3, 2026Updated last month
- Jupyter magic for cells expected to raise exceptions☆14Jan 31, 2019Updated 7 years ago
- View proteins and trajectories in the terminal☆119Aug 8, 2020Updated 6 years ago
- Benchmarking common tasks on proteins in various languages and packages☆43Dec 27, 2020Updated 5 years ago
- Python framework for multi-parameter optimization and evaluation of protein folding models☆18Apr 12, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- An SV caller from paired-end NGS data.☆19Updated this week
- Wikipedia Dashboard Widget for OS X☆12Feb 13, 2013Updated 13 years ago
- Faster, more accurate and entirely open source method for predicting contacts in proteins☆12May 21, 2018Updated 8 years ago
- Effector and Perturbation Estimation Engine (EPEE) conducts differential analysis of transcription factor activity from gene expression d…☆16Oct 3, 2019Updated 7 years ago
- Improved ab initio protein structure reconstruction☆15Mar 7, 2018Updated 8 years ago
- 20% cooler hinged polygons.☆15Apr 13, 2019Updated 7 years ago
- SDSC Summer Institute 2022 material☆15Aug 8, 2023Updated 3 years ago
- Lightweight iTunes controller for Mac OS X☆13Jan 24, 2025Updated last year
- Research Group Content Managment System☆16Oct 23, 2026Updated last week
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- SMTP server for asyncio☆14Sep 29, 2015Updated 11 years ago
- JupyterLab extension for py3Dmol☆23Jan 2, 2022Updated 4 years ago
- Hyperbolic Disk Embeddings for Directed Acyclic Graphs (ICML 2019)☆20May 13, 2019Updated 7 years ago
- Guess sentences from initial letters of each word☆24Aug 22, 2022Updated 4 years ago
- AgnosterJ: apjanke's fork of the Agnoster Zsh Theme☆20Sep 11, 2022Updated 4 years ago
- Takes query parameters from a url to create the first cell of a jupyter notebook.☆17Nov 13, 2024Updated last year
- PSIPRED Protein Secondary Structure Predictor☆60Oct 19, 2026Updated last week