Structural Bioinformatics Training Workshop & Hackathon 2018
☆60May 17, 2022Updated 4 years ago
Alternatives and similar repositories for mmtf-workshop-2018
Users that are interested in mmtf-workshop-2018 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.☆68Mar 27, 2023Updated 3 years ago
- Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.☆21Feb 1, 2019Updated 7 years ago
- Structural Bioinformatics Training Workshop & Hackathon 2017☆19Jan 23, 2018Updated 8 years ago
- Methods for mapping proteomics data on 3D protein structure.☆15Jan 18, 2020Updated 6 years ago
- Methods for mapping genomic data onto 3D protein structure.☆28May 17, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- 🔍 Fit3D - An application for template-based detection of small structural motifs in protein structures and macromolecular structure data…☆11Oct 16, 2018Updated 7 years ago
- Quickly generate, start and analyze benchmarks for molecular dynamics simulations.☆83Sep 5, 2024Updated last year
- Fast and versatile biomolecular structure PDB file parser using SQL queries☆24Mar 17, 2023Updated 3 years ago
- The javascript implementation of the MMTF format.☆11Jun 26, 2017Updated 8 years ago
- A web app to convert a PyMOL PSE file or PDB file to a easy to implement NGL.js view that can be implemented easily on any site☆12Nov 12, 2021Updated 4 years ago
- This repository includes the slides and the practicals for the course of Structural Bioinformatics of the MBB/QB degrees at the Universit…☆101Jan 29, 2026Updated 4 months ago
- a toolbox for the manipulation, modelling and analysis of molecular structures☆27Nov 27, 2025Updated 6 months ago
- ☆16May 11, 2026Updated last month
- 📖 mmCIF support for hybrid/integrative models☆26May 4, 2026Updated last month
- GPUs on demand by Runpod - Special Offer Available • AdRun AI, ML, and HPC workloads on powerful cloud GPUs—without limits or wasted spend. Deploy GPUs in under a minute and pay by the second.
- The python implementation of the MMTF API, decoder and encoder.☆45Jul 7, 2022Updated 3 years ago
- Tautomer ratios in solution☆28Sep 20, 2021Updated 4 years ago
- Tools for creating, analyzing and visualizing Conformation Space Networks☆18May 26, 2026Updated 2 weeks ago
- A novel approach to pose selection in protein-ligand docking based on graph theory.☆20Nov 22, 2016Updated 9 years ago
- An R package for extracting mutational signatures from vcf files☆11Feb 13, 2025Updated last year
- AlphaLink2: Integrating crosslinking MS data into Uni-Fold-Multimer☆68Aug 26, 2025Updated 9 months ago
- A tool that helps finding decoy molecules for a given target, provided a set of active molecules.☆17Feb 24, 2022Updated 4 years ago
- Set of useful HADDOCK utility scripts☆57Sep 19, 2025Updated 8 months ago
- A tutorial on how to create bioinformatics pipelines as bash scripts, Makefiles and using tools like Nextflow.☆17Nov 14, 2022Updated 3 years ago
- GPU virtual machines on DigitalOcean Gradient AI • AdGet to production fast with high-performance AMD and NVIDIA GPUs you can spin up in seconds. The definition of operational simplicity.
- Code to accompany "Practical Cheminformatics With Open Source Software"☆16Feb 24, 2022Updated 4 years ago
- Library for prediction of cryptic binding sites☆25Aug 6, 2025Updated 10 months ago
- Functions to scrape GPCR data from the web.☆19Nov 18, 2021Updated 4 years ago
- Visual Molecular Dynamics in Docker Container☆12Jan 1, 2015Updated 11 years ago
- PINY cleanup and new feature integration.☆13Dec 9, 2016Updated 9 years ago
- ☆11Mar 28, 2026Updated 2 months ago
- Machine learning experiments for CheckMyBlob☆14Jun 14, 2018Updated 8 years ago
- Quantum-chemistry methods in Julia. Based on Rick Muller's PyQuante2☆21Apr 9, 2021Updated 5 years ago
- Python code to extract features from Protein sequences for Machine Learning/Deep Learning☆20Mar 26, 2022Updated 4 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- MVP (Qi et al 2021) source code☆17May 11, 2021Updated 5 years ago
- A fully GPU-accelerated molecular dynamics program for the Martini force field☆36Sep 13, 2023Updated 2 years ago
- PCA and normal mode analysis of proteins☆21May 16, 2024Updated 2 years ago
- Use UCSF Chimera Python API in a standard interpreter☆59Mar 28, 2019Updated 7 years ago
- A package for molecular dynamics analysis and parallel tempering in GROMACS☆11May 25, 2021Updated 5 years ago
- A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files☆179Oct 10, 2019Updated 6 years ago
- A primer on statistical mechanics for biochemists☆48Sep 5, 2022Updated 3 years ago