proteinevolution / ToolkitLinks
The MPI Bioinformatics Toolkit
☆69Updated 3 months ago
Alternatives and similar repositories for Toolkit
Users that are interested in Toolkit are comparing it to the libraries listed below
Sorting:
- Visualise RNA secondary structure in consistent, reproducible and recognisable layouts☆75Updated 3 months ago
- VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.☆43Updated 2 months ago
- Evolutionary conservation estimation of residues or nucleotides☆51Updated 3 years ago
- MMseqs2 app to run on your workstation or servers☆97Updated 2 weeks ago
- Evolutionary velocity with protein language models☆94Updated 2 years ago
- PSIPRED Protein Secondary Structure Predictor☆58Updated 3 months ago
- Mutation effects predicted from sequence co-variation☆70Updated 8 years ago
- Python package and command line tool for epitope prediction☆52Updated last year
- An RNA manipulation library.☆56Updated last year
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆60Updated 6 months ago
- A Python framework for structural systems biology☆109Updated 4 years ago
- scripts and facilities for in-silico mutagenesis with FoldX☆61Updated 3 months ago
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆62Updated last year
- Automatic oligonucleotide design for PCR-based gene synthesis☆47Updated 6 years ago
- Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning☆90Updated last year
- A software package for computing features of peptides and proteins☆64Updated last year
- Comprehensive Python client for the Uniprot REST API☆52Updated 3 weeks ago
- Install alphafold on the local machine, get out of docker.☆104Updated 3 years ago
- An R package to calculate indices and theoretical physicochemical properties of peptides and protein sequences.☆92Updated last year
- A software-suite to perform multiple protein structure alignment and structure feature extraction.☆31Updated 2 years ago
- Physicochemical properties, indices and descriptors for amino-acid sequences.☆105Updated last month
- A Python package for mapping sequence aligned data onto protein structures☆36Updated 4 years ago
- BRENDA parser in python☆22Updated 3 years ago
- Glycan Analysis and Glycoinformatics Library for Python☆36Updated 5 months ago
- Draw RNA secondary structures in python.☆49Updated 4 months ago
- Python code to color a PDB structure based on parameters from a multiple sequence alignment☆32Updated 2 years ago
- ☆80Updated 2 years ago
- CodonBert: a BERT-based architecture tailored for codon optimization using the cross-attention mechanism.☆40Updated last year
- A Python platform for Structural Bioinformatics☆57Updated 7 months ago
- MOLeculAR structure annoTator☆33Updated last year