Alternatives and similar repositories for Toolkit

Users that are interested in Toolkit are comparing it to the libraries listed below

• r2dt-bio / R2DT
  Visualise RNA secondary structure in consistent, reproducible and recognisable layouts
  ☆74Updated last month
• Rostlab / ConSurf
  Evolutionary conservation estimation of residues or nucleotides
  ☆47Updated 3 years ago
• soedinglab / MMseqs2-App
  MMseqs2 app to run on your workstation or servers
  ☆97Updated this week
• psipred / psipred
  PSIPRED Protein Secondary Structure Predictor
  ☆58Updated 2 months ago
• brineylab / abstar
  VDJ assignment and antibody sequence annotation. Scalable from a single sequence to billions of sequences.
  ☆42Updated last month
• labstructbioinf / DeepCoil
  Fast and accurate prediction of coiled coil domains in protein sequences. ​
  ☆24Updated last year
• SBRG / ssbio
  A Python framework for structural systems biology
  ☆109Updated 4 years ago
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated last year
• ViennaRNA / forgi
  An RNA manipulation library.
  ☆57Updated last year
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆69Updated 8 years ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆103Updated 2 weeks ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆59Updated 5 months ago
• dmnfarrell / epitopepredict
  Python package and command line tool for epitope prediction
  ☆52Updated last year
• rcsb / rcsb-saguaro
  1D Feature Viewer
  ☆53Updated 4 months ago
• matthiaskoenig / brendapy
  BRENDA parser in python
  ☆22Updated 3 years ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆59Updated 2 months ago
• mobiusklein / glypy
  Glycan Analysis and Glycoinformatics Library for Python
  ☆36Updated 4 months ago
• davidhoover / DNAWorks
  Automatic oligonucleotide design for PCR-based gene synthesis
  ☆47Updated 6 years ago
• raghavagps / Pfeature
  A software package for computing features of peptides and proteins
  ☆64Updated last year
• wrf / pdbcolor
  Python code to color a PDB structure based on parameters from a multiple sequence alignment
  ☆32Updated 2 years ago
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆62Updated last year
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆90Updated last year
• pymodproject / pymod
  PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
  ☆82Updated 6 months ago
• UCLOrengoGroup / cath-tools
  Protein structure comparison tools such as SSAP and SNAP
  ☆65Updated last year
• ViennaRNA / forna
  Create force-directed graphs of RNA secondary structures.
  ☆105Updated 5 years ago
• prehensilecode / alphafold_singularity
  Singularity recipe for AlphaFold
  ☆36Updated 10 months ago
• Gardner-BinfLab / TISIGNER-ReactJS
  TISIGNER: Unleash the power of synthetic biology
  ☆26Updated 3 months ago
• TurtleTools / caretta
  A software-suite to perform multiple protein structure alignment and structure feature extraction.
  ☆31Updated 2 years ago
• nf-core / proteinfold
  Protein 3D structure prediction pipeline
  ☆86Updated last week
• alexarnimueller / modlAMP
  Python package for peptide sequence generation, peptide descriptor calculation and sequence analysis.
  ☆61Updated 6 months ago