Alternatives and similar repositories for mmtf-python

Users that are interested in mmtf-python are comparing it to the libraries listed below

• choderalab / ensembler
  Automated omics-scale protein modeling and simulation setup.
  ☆53Updated 4 years ago
• insilichem / pychimera
  Use UCSF Chimera Python API in a standard interpreter
  ☆59Updated 6 years ago
• cxhernandez / ipymol
  Control PyMOL sessions via IPython
  ☆61Updated 3 years ago
• speleo3 / pymol-psico
  Pymol ScrIpt COllection (PSICO)
  ☆63Updated 3 months ago
• soedinglab / pdbx
  pdbx is a parser module in python for structures of the protein data bank in the mmcif format
  ☆29Updated last year
• boscoh / pdbremix
  analyse PDB files, run molecular-dynamics & analyse trajectories
  ☆62Updated 7 years ago
• makson96 / Dynamics
  Dynamics PyMOL Plugin
  ☆45Updated last year
• jchodera / statmech-for-biochemists
  A primer on statistical mechanics for biochemists
  ☆47Updated 3 years ago
• lewisacidic / scikit-chem
  A high level cheminformatics package for the Scientific Python stack, built on RDKit.
  ☆65Updated 5 years ago
• samirelanduk / atomium
  Python macromolecular parsing (with .pdb/.cif/.mmtf parsing and production)
  ☆106Updated last year
• graik / biskit
  A Python platform for Structural Bioinformatics
  ☆57Updated 8 months ago
• ocramz / jupyter-docker-pymol
  Container-based installation of pymol, with interaction through the browser via Jupyter notebook
  ☆20Updated 6 years ago
• sbl-sdsc / mmtf-pyspark
  Methods for the parallel and distributed analysis and mining of the Protein Data Bank using MMTF and Apache Spark.
  ☆67Updated 2 years ago
• donaldlab / OSPREY3
  Open Source Protein REdesign for You v3
  ☆55Updated last week
• pybel / pybel
  🌶️ An ecosystem in Python for working with the Biological Expression Language (BEL)
  ☆137Updated last year
• schenc3 / InteractiveROSETTA
  A wxPython graphical interface for the PyRosetta and Rosetta protein modeling suites
  ☆29Updated 7 years ago
• BobbyLangan / DeNovoDesignofBioactiveProteinSwitches
  Code used in the manuscript for De Novo Design of Bioactive Protein Switches
  ☆16Updated 6 years ago
• MolQL / molql
  Molecular Query Language
  ☆34Updated last year
• protwis / protwis
  Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…
  ☆43Updated last month
• rcsb / mmtf
  The specification of the MMTF format for biological structures
  ☆44Updated last year
• debbiemarkslab / EVzoom
  Visually explore covariation in protein families
  ☆40Updated 5 years ago
• Faezov / PDBrenum
  ☆30Updated 6 months ago
• Kortemme-Lab / ddg
  A DDG benchmark capture containing the benchmark dataset and benchmarked protocol captures.
  ☆17Updated 9 years ago
• chopralab / lemon
  A framework for rapidly mining structural information from the Protein Data Bank
  ☆53Updated 5 years ago
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆57Updated last month
• salilab / imp
  The Integrative Modeling Platform
  ☆77Updated this week
• PDB-REDO / libcifpp
  Library containing code to manipulate mmCIF and PDB files
  ☆36Updated last week
• MooersLab / pymolsnips
  Pymolsnips is a library of PyMOL scripting language code fragments for several popular text editors.
  ☆45Updated last year
• jensengroup / fragbuilder
  fragbuilder is a tool to create, setup and analyze QM calculations on peptides.
  ☆15Updated 11 years ago
• lightdock / lightdock-python2.7
  Protein-protein, protein-peptide and protein-DNA docking framework based on the GSO algorithm
  ☆24Updated 5 years ago