Alternatives and similar repositories for pdbremix

Users that are interested in pdbremix are comparing it to the libraries listed below

• speleo3 / pymol-psico
  Pymol ScrIpt COllection (PSICO)
  ☆61Updated last month
• pymodproject / pymod
  PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
  ☆82Updated 7 months ago
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆56Updated 2 weeks ago
• makson96 / Dynamics
  Dynamics PyMOL Plugin
  ☆45Updated last year
• Faezov / PDBrenum
  ☆30Updated 4 months ago
• graik / biskit
  A Python platform for Structural Bioinformatics
  ☆57Updated 6 months ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆55Updated 3 weeks ago
• gerdos / PyRAMA
  Python implementation of the Ramachandran plot
  ☆52Updated 2 months ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆60Updated 2 months ago
• insilichem / pychimera
  Use UCSF Chimera Python API in a standard interpreter
  ☆59Updated 6 years ago
• cmbi / dssp
  The DSSP building software
  ☆47Updated 2 years ago
• choderalab / ensembler
  Automated omics-scale protein modeling and simulation setup.
  ☆53Updated 4 years ago
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆44Updated last year
• clauswilke / PeptideBuilder
  A simple Python library to generate model peptides
  ☆88Updated 4 years ago
• protwis / protwis
  Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…
  ☆43Updated last week
• donaldlab / OSPREY3
  Open Source Protein REdesign for You v3
  ☆54Updated 3 months ago
• cxhernandez / ipymol
  Control PyMOL sessions via IPython
  ☆61Updated 2 years ago
• tlemmin / glycosylator
  Framework for the rapid modeling glycans and glycoproteins.
  ☆31Updated 2 years ago
• JoaoRodrigues / interfacea
  An open-source library for the analysis of protein interactions.
  ☆32Updated 3 years ago
• n-szulc / fingeRNAt
  Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.
  ☆29Updated 3 years ago
• RashmiKumari / g_mmpbsa
  MM-PBSA method for GROMACS. For full description, please visit homepage:
  ☆67Updated 4 months ago
• dwhswenson / contact_map
  Contact map analysis for biomolecules; based on MDTraj
  ☆46Updated 9 months ago
• akiyamalab / MEGADOCK
  An ultra-high-performance protein-protein docking for heterogeneous supercomputers
  ☆65Updated last year
• rcsb / py-rcsbsearchapi
  Python interface for the RCSB PDB search API.
  ☆65Updated 6 months ago
• drorlab / GPCR-mining
  Functions to scrape GPCR data from the web.
  ☆17Updated 3 years ago
• volkamerlab / opencadd
  A Python library for structural cheminformatics
  ☆102Updated 5 months ago
• sokrypton / map_align
  Contact map alignment
  ☆41Updated 4 years ago
• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆60Updated 6 months ago
• zhenglz / dockingML
  A package for MD, Docking and Machine learning drug discovery pipeline
  ☆44Updated 5 years ago
• LPDI-EPFL / rstoolbox
  Python Toolbox For Rosetta Silent Files Processing
  ☆16Updated 6 years ago