boscoh / pdbremixLinks
analyse PDB files, run molecular-dynamics & analyse trajectories
☆61Updated 7 years ago
Alternatives and similar repositories for pdbremix
Users that are interested in pdbremix are comparing it to the libraries listed below
Sorting:
- PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.☆82Updated 5 months ago
- Dynamics PyMOL Plugin☆44Updated last year
- scripts and facilities for in-silico mutagenesis with FoldX☆57Updated 3 weeks ago
- A Python platform for Structural Bioinformatics☆57Updated 4 months ago
- Pymol ScrIpt COllection (PSICO)☆60Updated last month
- ☆30Updated 2 months ago
- Set of useful HADDOCK utility scripts☆53Updated 11 months ago
- Python implementation of the Ramachandran plot☆51Updated 3 weeks ago
- Interactive Python notebooks for PDBe API training☆55Updated last month
- The DSSP building software☆46Updated 2 years ago
- Framework for the rapid modeling glycans and glycoproteins.☆30Updated last year
- Software for detecting non-covalent interactions formed within complexes of nucleic acids with ligands.☆28Updated 3 years ago
- Python package to manage protein structures and their annotations☆43Updated last year
- Control PyMOL sessions via IPython☆61Updated 2 years ago
- A mirror of official bio3d development site at Bitbucket: https://bitbucket.org/Grantlab/bio3d. See also bio3d website: http://thegrantl…☆24Updated 2 years ago
- Protwis is the backbone of the GPCRdb. The GPCRdb contains reference data, interactive visualisation and experiment design tools for G pr…☆42Updated 2 weeks ago
- An open-source library for the analysis of protein interactions.☆29Updated 3 years ago
- Open Source Protein REdesign for You v3☆53Updated last month
- Automated omics-scale protein modeling and simulation setup.☆53Updated 3 years ago
- Use UCSF Chimera Python API in a standard interpreter☆58Updated 6 years ago
- ☆85Updated last year
- Contact map analysis for biomolecules; based on MDTraj☆45Updated 7 months ago
- A simple Python library to generate model peptides☆87Updated 4 years ago
- MM-PBSA method for GROMACS. For full description, please visit homepage:☆67Updated 2 months ago
- Contact map alignment☆41Updated 4 years ago
- A Python library for structural cheminformatics☆102Updated 3 months ago
- A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence☆56Updated 4 months ago
- Create DSSP and HSSP files☆92Updated last year
- An ultra-high-performance protein-protein docking for heterogeneous supercomputers☆63Updated last year
- Analyse Nucleic Acids Structure and Simulations with baRNAba☆45Updated last year