Alternatives and similar repositories for protein-science:

Users that are interested in protein-science are comparing it to the libraries listed below

• clauswilke / PeptideBuilder
  A simple Python library to generate model peptides
  ☆81Updated 4 years ago
• harryjubb / arpeggio
  Calculation of interatomic interactions in molecular structures
  ☆72Updated 3 years ago
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆117Updated 4 months ago
• rdkit / UGM_2016
  Materials from the 2016 RDKit UGM
  ☆39Updated 8 years ago
• speleo3 / pymol-psico
  Pymol ScrIpt COllection (PSICO)
  ☆59Updated 7 months ago
• mittinatten / freesasa
  C-library for calculating Solvent Accessible Surface Areas
  ☆126Updated 9 months ago
• sokrypton / GREMLIN_CPP
  GREMLIN - learn MRF/potts model from input multiple sequence alignment! Implementation now available in C++ and Tensorflow/Python!
  ☆53Updated 2 years ago
• sjbertolani / pyrosettabook
  ☆14Updated 4 years ago
• harmslab / pdbtools
  A set of tools for manipulating and doing calculations on wwPDB macromolecule structure files
  ☆175Updated 5 years ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆51Updated 6 months ago
• maccallumlab / meld
  Modeling with limited data
  ☆56Updated 3 months ago
• insilichem / pychimera
  Use UCSF Chimera Python API in a standard interpreter
  ☆58Updated 5 years ago
• getcontacts / getcontacts
  Library for computing dynamic non-covalent contact networks in proteins throughout MD Simulation
  ☆108Updated last year
• rlabduke / MolProbity
  Protein and nucleic acid validation service
  ☆68Updated last year
• soedinglab / CCMpred
  Protein Residue-Residue Contacts from Correlated Mutations predicted quickly and accurately.
  ☆107Updated last year
• volkamerlab / opencadd
  A Python library for structural cheminformatics
  ☆94Updated 2 weeks ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆109Updated last year
• Acellera / moleculekit
  MoleculeKit: Your favorite molecule manipulation kit
  ☆212Updated last week
• pymodproject / pymod
  PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
  ☆76Updated last week
• MobleyLab / drug-computing
  Educational materials for, and related to, UC Irvine's Drug Discovery Computing Techniques course (PharmSci 175/275), currently taught by…
  ☆151Updated 2 weeks ago
• SBRG / ssbio
  A Python framework for structural systems biology
  ☆107Updated 4 years ago
• JinyuanSun / PymolFold
  Protein folding in Pymol
  ☆105Updated last month
• gjoni / trDesign
  trRosetta for protein design
  ☆177Updated 3 years ago
• reymond-group / map4
  The MinHashed Atom Pair fingerprint of radius 2
  ☆112Updated last year
• PDBeurope / pdbe-api-training
  Interactive Python notebooks for PDBe API training
  ☆49Updated last month
• hiranumn / DeepAccNet
  Pytorch/Python3 implementation of DeepAccNet, protein model accuracy evaluator.
  ☆84Updated 3 years ago
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆129Updated this week
• gerdos / PyRAMA
  Python implementation of the Ramachandran plot
  ☆43Updated 5 years ago
• ElArkk / jax-unirep
  Reimplementation of the UniRep protein featurization model.
  ☆104Updated 6 months ago
• RashmiKumari / g_mmpbsa
  MM-PBSA method for GROMACS. For full description, please visit homepage:
  ☆67Updated this week