rcsb / rcsb-saguaro

Related projects ⓘ

Alternatives and complementary repositories for rcsb-saguaro

• psipred / s4pred
  A tool for accurate prediction of a protein's secondary structure from only it's amino acid sequence
  ☆48Updated 4 months ago
• KULL-Centre / _2022_ML-ddG-Blaabjerg
  ☆46Updated 5 months ago
• fhalab / evSeq
  Computational tools for extremely low-cost, massively parallel amplicon-based sequencing of every variant in protein mutant libraries.
  ☆30Updated 2 years ago
• patrickbryant1 / SpeedPPI
  Rapid protein-protein interaction network creation from multiple sequence alignments with Deep Learning
  ☆78Updated 8 months ago
• ELELAB / mutatex
  scripts and facilities for in-silico mutagenesis with FoldX
  ☆51Updated this week
• MPI-Dortmund / pymissense
  PyMissense creates the pathogenicity plot and modified pdb as shown in the AlphaMissense paper for custom proteins.
  ☆22Updated last year
• labstructbioinf / localpdb
  Python package to manage protein structures and their annotations
  ☆40Updated 9 months ago
• soedinglab / MMseqs2-App
  MMseqs2 app to run on your workstation or servers
  ☆65Updated last week
• ncbi / SSDraw
  ☆79Updated 9 months ago
• haddocking / haddock-tools
  Set of useful HADDOCK utility scripts
  ☆48Updated 2 months ago
• minmarg / gtalign_alpha
  GTalign, HPC protein structure alignment, superposition and search (alpha release)
  ☆36Updated 2 months ago
• althonos / peptides.py
  Physicochemical properties, indices and descriptors for amino-acid sequences.
  ☆72Updated 2 months ago
• akiyamalab / MEGADOCK
  An ultra-high-performance protein-protein docking for heterogeneous supercomputers
  ☆50Updated 11 months ago
• sokrypton / map_align
  Contact map alignment
  ☆39Updated 3 years ago
• KIT-MBS / pydca
  Direct coupling analysis software for protein and RNA sequences
  ☆47Updated last year
• debbiemarkslab / EVmutation
  Mutation effects predicted from sequence co-variation
  ☆61Updated 7 years ago
• CongLabCode / DPAM
  A domain parser for Alphafold models
  ☆32Updated 11 months ago
• PDB-REDO / alphafill
  AlphaFill is an algorithm based on sequence and structure similarity that “transplants” missing compounds to the AlphaFold models. By add…
  ☆92Updated this week
• sarisabban / RosettaDesign
  RosettaDesign using PyRosetta
  ☆30Updated 5 years ago
• pymodproject / pymod
  PyMod 3 - sequence similarity searches, multiple sequence/structure alignments, and homology modeling within PyMOL.
  ☆73Updated 5 months ago
• cbalbin-bio / pymol-color-alphafold
  PyMOL extension to color AlphaFold structures by confidence (pLDDT).
  ☆73Updated 4 months ago
• BernhoferM / TMbed
  Transmembrane proteins predicted through Language Model embeddings
  ☆30Updated 8 months ago
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆110Updated last week
• jcheongs / alphafold-multimer
  ☆25Updated 2 years ago
• mattarnoldbio / alphapickle
  ☆30Updated 8 months ago
• robpearc / DeepFoldRNA
  ☆29Updated 11 months ago
• psipred / DMPfold2
  Fast and accurate protein structure prediction
  ☆49Updated last year
• gerdos / PyRAMA
  Python implementation of the Ramachandran plot
  ☆43Updated 4 years ago
• molstar / rcsb-molstar
  RCSB PDB apps and props based on Mol*
  ☆27Updated 3 weeks ago
• greener-group / progres
  Fast protein structure searching or your money back
  ☆81Updated 2 months ago