Alternatives and similar repositories for cwl-novice-tutorial

Users that are interested in cwl-novice-tutorial are comparing it to the libraries listed below

• MaayanLab / FAIRshake
  ☆10Updated 8 months ago
• aCLImatise / CliHelpParser
  Reads the output from CLI help commands, and generates machine readable schemas (CWL etc)
  ☆14Updated 4 years ago
• ELIXIR-Belgium / ena-upload-container
  This is a repository to build a Galaxy container which can be used to remove human traces from sequence reads and upload raw SARS-Cov-2 s…
  ☆10Updated last year
• common-workflow-language / cwl-utils
  Python utilities for CWL
  ☆39Updated last week
• fairgenomes / fairgenomes-semantic-model
  FAIR Genomes semantic metadata model. The core is a YAML file, which is transformed into all other desired output formats.
  ☆12Updated 4 months ago
• hexylena / argparse2tool
  transparently build CWL and Galaxy XML tool definitions for any script that uses argparse
  ☆27Updated 7 months ago
• C3BI-pasteur-fr / ReGaTE
  Registration of Galaxy Tools in Elixir
  ☆12Updated 6 years ago
• gallantries / gallantries.github.io
  Gallantries 2.0
  ☆10Updated 2 years ago
• umccr / cwl-ica
  A collection of cwl-ica workflows along with a user guide for the commands to use and contributions guide
  ☆10Updated last week
• bgruening / docker-ipython-notebook
  IPython running in a docker container. This image can be used to integrate IPython into Galaxy
  ☆17Updated 9 years ago
• EBI-Metagenomics / ebi-metagenomics-cwl
  This repository contains the CWL description of the EBI Metagenomics pipeline
  ☆21Updated 4 years ago
• bgruening / coding_for_big_data
  X things you should take into consideration if you code for big data analysis
  ☆23Updated 7 years ago
• carpentries-incubator / snakemake-novice-bioinformatics
  Introduction to Snakemake for Bioinformatics
  ☆19Updated this week
• biojs / biojs2galaxy
  A fast tool to convert BioJS components into Galaxy visualization plugins.
  ☆14Updated 4 years ago
• common-workflow-lab / ipython2cwl
  IPython2CWL is a tool for converting IPython Jupyter Notebooks to CWL Command Line Tools by simply providing typing annotation.
  ☆15Updated 2 years ago
• NIH-HPC / snakemake-class
  Class materials for the NIH HPC snakemake class
  ☆16Updated 9 months ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 6 years ago
• common-workflow-language / user_guide
  The CWL v1.0 - v1.2 user guide
  ☆42Updated 8 months ago
• sapporo-wes / tonkaz
  CLI tool to verify workflow reproducibility
  ☆16Updated last year
• Snakemake-Profiles / pbs-torque
  ☆16Updated last year
• geneontology / helpdesk
  The Gene Ontology Helpdesk
  ☆16Updated 4 months ago
• inutano / cwl-metrics
  Accumulating container resource usage with workflow metadata
  ☆19Updated 4 years ago
• bioboxes / bioboxes.org
  The website for bioboxes
  ☆11Updated 8 years ago
• workflux / workflUX
  An open-source, cloud-ready web application for simplified deployment of big data workflows.
  ☆33Updated last month
• fair-research / bdbag
  Big Data Bag Utilities
  ☆49Updated 2 weeks ago
• carpentries / undergrad-education-conversations
  Conversations about teaching computational skills to undergraduates
  ☆12Updated 3 years ago
• IFB-ElixirFr / ReproHackathon
  Série de hackathons pour la reproductibilité - Une action MaDICS ReproVirtuFlow
  ☆12Updated 5 years ago
• NCBI-Hackathons / SPeW
  Automatic Packaging and Distribution of Bioinformatics Pipelines
  ☆26Updated 7 years ago
• elixir-europe / BioHackathon-projects-2020
  This repository is meant for the participants of the BioHackathon hosted in Barcelona in Nov 2020 to share ideas, create issues, manage p…
  ☆22Updated 2 years ago
• bio-tools / biotoolsSchema
  biotoolsSchema : Tool description data model for computational tools in life sciences
  ☆38Updated last year