ASHISRAVINDRAN / stardist_pytorchLinks
StarDist PyTorch
☆47Updated 3 years ago
Alternatives and similar repositories for stardist_pytorch
Users that are interested in stardist_pytorch are comparing it to the libraries listed below
Sorting:
- CoNIC Challenge☆69Updated last year
- This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their mo…☆66Updated 4 years ago
- Interactive Segmentation of Nucleus☆66Updated 3 years ago
- Use this to download all elements of the BCSS dataset described in: Amgad M, Elfandy H, ..., Gutman DA, Cooper LAD. Structured crowdsourc…☆175Updated 3 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆71Updated 3 years ago
- Self-supervised nuclei segmentation (MICCAI 2020)☆44Updated 4 years ago
- One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification☆99Updated last year
- This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples…☆43Updated 2 years ago
- NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation☆55Updated 3 years ago
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆113Updated this week
- H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.☆57Updated 2 years ago
- Tool to visualize gigantic pathology images and use AI to segment cancer cells and present as an overlay☆76Updated last year
- Implementation of Cluster-to-Conquer: A Framework for End-to-End Multi-Instance Learning for Whole Slide Image Classification approach.☆59Updated 4 years ago
- [TMI'2021][ISBI MoNuSAC'2020] 11th place solution to Multi-organ nuclei segmentation and classification challenge.☆32Updated 4 years ago
- ☆67Updated last year
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆26Updated 2 years ago
- Evaluation code for the PanNuke dataset☆29Updated 5 years ago
- OCELOT 2023: Cell Detection from Cell-Tissue Interaction☆17Updated last month
- Scalable Instance Segmentation using PyTorch & PyTorch Lightning.☆146Updated 8 months ago
- DeeperHistReg - Source Code☆85Updated last year
- Encoder-Decoder Cell and Nuclei segmentation models☆95Updated 2 months ago
- PyTorch implementation of HoverNet as described in https://arxiv.org/abs/1812.06499☆23Updated 5 years ago
- Re-stained whole slide image alignment☆36Updated 2 years ago
- Whole Slide Image segmentation with weakly supervised multiple instance learning on TCGA | MICCAI2020 https://arxiv.org/abs/2004.05024☆142Updated 4 years ago
- Use streaming to train whole-slides images with single image-level labels, by reducing GPU memory requirements with 99%.☆78Updated 3 years ago
- ☆30Updated 6 years ago
- HistoSegNet: Semantic Segmentation of Histological Tissue Type in Whole Slide Images (ICCV 2019)☆94Updated 6 years ago
- ☆69Updated 3 years ago
- Repository for "SAM-Path: A Segment Anything Model for Semantic Segmentation in Digital Pathology" (MedAGI2023, MICCAI2023 workshop)☆51Updated last year
- ☆13Updated last year