StarDist PyTorch
☆47Nov 13, 2022Updated 3 years ago
Alternatives and similar repositories for stardist_pytorch
Users that are interested in stardist_pytorch are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- PyTorch implementation of 2D and 3D StarDist - Object Detection with Star-convex Shapes☆28Feb 10, 2023Updated 3 years ago
- ☆10Nov 5, 2020Updated 5 years ago
- The code of Triple U-net: Hematoxylin-aware Nuclei Segmentation with Progressive Dense Feature Aggregation.☆20Mar 17, 2022Updated 4 years ago
- ☆14Jun 11, 2023Updated 2 years ago
- This repository includes the codes and descriptions to create a fully annotated dataset of nuclei from cryosectioned histological samples…☆45Feb 8, 2023Updated 3 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- StarDist - Object Detection with Star-convex Shapes☆1,204Feb 14, 2026Updated 2 months ago
- Code Implementation for EmbedSeg, an Instance Segmentation Method for Microscopy Images☆127Feb 14, 2024Updated 2 years ago
- PointNu-Net Project☆19Dec 28, 2023Updated 2 years ago
- Nuclei segmentation and classification (Cancer cells)☆25Jun 4, 2024Updated last year
- Deep-learning based semantic and instance segmentation for 3D Electron Microscopy and other bioimage analysis problems based on pytorch.☆122Apr 12, 2026Updated last week
- Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, …☆245Apr 2, 2026Updated 2 weeks ago
- A style-aware deep learning model for adaptive cell instance segmentation by contrastive fine-tuning.☆10Apr 19, 2024Updated 2 years ago
- ☆12Mar 1, 2026Updated last month
- ☆24Aug 27, 2020Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- [In Progressing]HaN5K: A project to develop foundation models for structure delineation in head and neck radiotherapy based on more than …☆17Dec 25, 2023Updated 2 years ago
- Fast, Simple Calcium Imaging Segmentation with Fully Convolutional Networks (https://arxiv.org/abs/1707.06314)☆29Dec 8, 2022Updated 3 years ago
- [ECCV 2024] Code for "Unleashing the Power of Prompt-driven Nucleus Instance Segmentation"☆59Jan 9, 2025Updated last year
- Dense Steerable Filter CNN☆76Nov 21, 2022Updated 3 years ago
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆704Oct 27, 2023Updated 2 years ago
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆73Nov 21, 2022Updated 3 years ago
- H&E histopathological staining normalization☆112Jan 24, 2020Updated 6 years ago
- Correlated and Signal-Dependent Denoising☆31Apr 7, 2026Updated last week
- [MICCAI 2019] Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding Boxes☆83Dec 4, 2019Updated 6 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Color Deconvolution for quantification of histological staining☆12Dec 18, 2018Updated 7 years ago
- ZELDA: a 3D Image Segmentation and Parent to Child relation plugin for microscopy image analysis in napari☆25Nov 25, 2025Updated 4 months ago
- Scalable Instance Segmentation using PyTorch & PyTorch Lightning.☆150Apr 22, 2025Updated 11 months ago
- The code of SRIBD-Med Team for NeurIPS2022 Cell Segmentation Challenge☆15Jul 23, 2023Updated 2 years ago
- A Python toolkit for pathology image analysis algorithms.☆471Apr 6, 2026Updated last week
- This is the MATLAB code for stain separation and color normalization in computational pathology (histopathological images)☆70Mar 12, 2016Updated 10 years ago
- Official implementation of "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection". (Howeve…☆23Apr 10, 2023Updated 3 years ago
- This repository contains my implementations of the algorithms which MoNuSAC participants could use for data preparation to train their mo…☆67Dec 2, 2021Updated 4 years ago
- ☆13Aug 30, 2024Updated last year
- Managed Kubernetes at scale on DigitalOcean • AdDigitalOcean Kubernetes includes the control plane, bandwidth allowance, container registry, automatic updates, and more for free.
- Instance segmentation via deep pixel embedding☆24Sep 4, 2020Updated 5 years ago
- Usiigaci: stain-free cell tracking in phase contrast microscopy enabled by supervised machine learning☆205Sep 15, 2020Updated 5 years ago
- Guides and code for 3D nuclear instance segmentation☆23Dec 2, 2025Updated 4 months ago
- Conversion of Electrocardiography paper records to binarization and converting to digital form in order to extract features to feed in th…☆10Dec 16, 2020Updated 5 years ago
- A JupyterBook site for napari workshop materials☆10Jul 11, 2022Updated 3 years ago
- ☆11Mar 24, 2023Updated 3 years ago
- Python implementation of Underdamped Langevin Inference, a method to infer the dynamical equation of underdamped stochastic systems from …☆17Jun 20, 2025Updated 9 months ago