Deep Learning Inferred Multiplex ImmunoFluorescence for IHC Image Quantification (https://deepliif.org) [Nature Machine Intelligence'22, CVPR'22, MICCAI'23, Histopathology'23, MICCAI'24]
☆254Apr 30, 2026Updated 2 months ago
Alternatives and similar repositories for DeepLIIF
Users that are interested in DeepLIIF are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Interactive deep learning cell segmentation using partial annotations [MICCAI'26]☆44Jun 3, 2026Updated 3 weeks ago
- Tools for computational pathology☆454Jun 11, 2026Updated 2 weeks ago
- Spatial Multiomics Profiler for Spatial Characterization of Tissue Microenvironment (https://smprofiler.io)☆23Jun 11, 2026Updated 2 weeks ago
- Computational Pathology Toolbox developed by TIA Centre, University of Warwick.☆536Jun 16, 2026Updated 2 weeks ago
- A standardized Python API with necessary preprocessing, machine learning and explainability tools to facilitate graph-analytics in comput…☆271Dec 23, 2023Updated 2 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Library for Digital Pathology Image Processing☆459Jun 24, 2026Updated last week
- One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification☆102Nov 27, 2024Updated last year
- Computational Endoscopy Platform (advanced deep learning toolset for analyzing endoscopy videos) [MICCAI'25, MICCAI'22, MICCAI'21, ISBI'2…☆83Jun 29, 2025Updated last year
- Virtual Alignment of pathoLogy Image Series☆226Jun 25, 2025Updated last year
- H&E ROI-Level and WSI-Level Nuclei Segmentation with HoVer-Net☆10Jul 30, 2024Updated last year
- CellViT: Vision Transformers for Precise Cell Segmentation and Classification☆385Jul 23, 2025Updated 11 months ago
- Powerful, open-source AI tools for digital pathology.☆365May 7, 2026Updated last month
- ☆45Jan 10, 2022Updated 4 years ago
- Simultaneous Nuclear Instance Segmentation and Classification in H&E Histology Images.☆721Oct 27, 2023Updated 2 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Open source tools for computational pathology - Nature BME☆1,701Apr 14, 2025Updated last year
- ☆214Jul 23, 2025Updated 11 months ago
- Pathology Foundation Model - Nature Medicine☆750Mar 26, 2025Updated last year
- ☆51Jan 7, 2025Updated last year
- Scripts for data processing☆50Jun 6, 2024Updated 2 years ago
- Hierarchical Image Pyramid Transformer - CVPR 2022 (Oral)☆622Mar 19, 2024Updated 2 years ago
- ☆72Sep 23, 2024Updated last year
- HistoQC is an open-source quality control tool for digital pathology slides☆327Apr 13, 2026Updated 2 months ago
- Data and code to accompany our Nature publication☆49May 3, 2022Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- An open-source digital pathology based rapid image annotation tool☆90Jun 22, 2026Updated last week
- HoVer-Net inference code for simultaneous nuclear segmentation and classification☆74Nov 21, 2022Updated 3 years ago
- Ressources of histopathology datasets☆556Mar 6, 2026Updated 3 months ago
- Prov-GigaPath: A whole-slide foundation model for digital pathology from real-world data☆618May 16, 2025Updated last year
- Code for replicating results presented in the paper: "Quantifying Explainers of Graph Neural Networks in Computational Pathology"☆44May 19, 2021Updated 5 years ago
- ☆17Feb 18, 2025Updated last year
- ☆13Aug 30, 2024Updated last year
- Prototypical multiple instance learning for predicting lymph node metastasis of breast cancer from whole-slide pathological images☆32Sep 3, 2023Updated 2 years ago
- ☆72Jun 15, 2021Updated 5 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Fusing Histology and Genomics via Deep Learning - IEEE TMI☆328Aug 22, 2022Updated 3 years ago
- Encoder-Decoder Cell and Nuclei segmentation models☆103Nov 14, 2025Updated 7 months ago
- A generative toolkit to translate H&E images to multiplexed IHC☆65Dec 11, 2024Updated last year
- The official deployment of the Digital Slide Archive and HistomicsTK.☆138Jun 23, 2026Updated last week
- Multimodal Whole Slide Foundation Model for Pathology - Nature Medicine☆353Dec 13, 2025Updated 6 months ago
- Transcriptomics-guided Slide Representation Learning in Computational Pathology - CVPR 2024☆116Oct 15, 2024Updated last year
- ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…☆68Nov 3, 2022Updated 3 years ago