Alternatives and similar repositories for cellseg_models.pytorch

Users that are interested in cellseg_models.pytorch are comparing it to the libraries listed below

• peng-lab / HistoBistro
  Weakly-supervised learning pipeline for histopathology images. Publications: Biomarker prediction in colorectal cancer (CRC)
  ☆78Updated last year
• TissueImageAnalytics / cerberus
  One Model is All You Need: Multi-Task Learning Enables Simultaneous Histology Image Segmentation and Classification
  ☆90Updated 6 months ago
• wenqi006 / SlideGraph
  ☆55Updated 3 years ago
• khtao / StainNet
  StainNet: a fast and robust stain normalization network
  ☆46Updated 3 years ago
• MWod / DeeperHistReg
  DeeperHistReg - Source Code
  ☆60Updated last year
• choosehappy / HoverFast
  Blazing fast nuclei segmentation for brightfield Whole Slide Images
  ☆35Updated 3 months ago
• PathologyDataScience / NuCLS
  NuCLS: A scalable crowdsourcing, deep learning approach and dataset for nucleus classification, localization and segmentation
  ☆53Updated 3 years ago
• simongraham / hovernet_inference
  HoVer-Net inference code for simultaneous nuclear segmentation and classification
  ☆67Updated 2 years ago
• MaryamHaghighat / PathProfiler
  Pipeline for computational pathology
  ☆35Updated last year
• KatherLab / HIA
  Histopathology Image Analysis
  ☆92Updated last year
• PathologyDataScience / HiPS
  Histomic Prognostic Signature (HiPS): A population-level computational histologic signature for invasive breast cancer prognosis
  ☆28Updated last year
• vqdang / H2T
  ☆35Updated 2 years ago
• georg-wolflein / pathology-foundation-models
  List of pathology feature extractors and foundation models
  ☆128Updated 4 months ago
• EIDOSLAB / torchstain
  Stain normalization tools for histological analysis and computational pathology
  ☆143Updated 4 months ago
• digitalpathologybern / hover_next_inference
  Inference code for HoVer-NeXt
  ☆35Updated last month
• MathOnco / valis
  Virtual Alignment of pathoLogy Image Series
  ☆157Updated 5 months ago
• CielAl / torch-staintools
  Pytorch-adaptation of GPU-accelerated StainTool's stain normalization algorithms
  ☆30Updated last year
• mahmoodlab / Patho-Bench
  Standardized benchmark for computational pathology foundation models.
  ☆75Updated last week
• cwlkr / torchvahadane
  Gpu accelerated vahadane stain normalization for Digital Pathology workflows.
  ☆25Updated last year
• smujiang / WSITools
  Tools for whole slide image (WSI) processing. Especially for (pairwise) patch extraction, annotation parsing and data preparation for dee…
  ☆52Updated 5 months ago
• KatherLab / STAMP
  Solid Tumor Associative Modeling in Pathology
  ☆79Updated this week
• mahmoodlab / TriPath
  Analysis of 3D pathology samples using weakly supervised AI - Cell
  ☆99Updated 4 months ago
• wanghao14 / Stain_Normalization
  Some stain normalization code
  ☆88Updated 2 years ago
• histocartography / zoommil
  ZoomMIL is a multiple instance learning (MIL) method that learns to perform multi-level zooming for efficient Whole-Slide Image (WSI) cla…
  ☆66Updated 2 years ago
• mahmoodlab / PANTHER
  Morphological Prototyping for Unsupervised Slide Representation Learning in Computational Pathology - CVPR 2024
  ☆133Updated 3 months ago
• KatherLab / marugoto
  Tools to build deep learning pipelines.
  ☆101Updated 6 months ago
• computational-cell-analytics / patho-sam
  Segment Anything for Histopathology
  ☆30Updated last week
• mahmoodlab / TRIDENT
  Toolkit for large-scale whole-slide image processing.
  ☆231Updated 2 weeks ago
• DIAGNijmegen / pathology-he-auto-augment
  H&E tailored Randaugment: automatic data augmentation policy selection for H&E-stained histopathology.
  ☆54Updated last year
• DIAGNijmegen / pathology-whole-slide-data
  A package for working with whole-slide data including a fast batch iterator that can be used to train deep learning models.
  ☆102Updated 6 months ago