A deep-learning pipeline for segmentation of ambiguous microscopic images.
☆65Aug 3, 2026Updated last week
Alternatives and similar repositories for deepflash2
Users that are interested in deepflash2 are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Minimal fastai code needed for working with pytorch☆15Aug 25, 2021Updated 4 years ago
- HDF5 plugin for ImageJ and Fiji.☆12Nov 5, 2024Updated last year
- napari plugin for cellpose (see www.cellpose.org) - an anatomical segmentation tool☆66Oct 27, 2024Updated last year
- Simple App to visualize single cell datasets☆22Apr 12, 2018Updated 8 years ago
- Code for COVID19 CT labeling. Submillimetric CT dataset provided as well.☆13Feb 16, 2021Updated 5 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Python package to export tensorflow models as DeepImageJ bundled models☆17Aug 10, 2022Updated 4 years ago
- Specter: linear deconvolution for targeted analysis of data-independent acquisition mass spectrometry proteomics☆18Oct 11, 2018Updated 7 years ago
- An Interactive Image Segmentation Filter for Multiplex Microscopy☆35Aug 5, 2026Updated last week
- A Python GUI-based framework for segmentation, tracking and cell cycle annotations of microscopy data☆200Updated this week
- HuBMAP: Hacking the Kidney Kaggle competition☆12May 12, 2021Updated 5 years ago
- Example of using the SAINT architecture in fastai☆12Aug 25, 2021Updated 4 years ago
- Kaggle HuBMAP 1st Place Solution☆74May 18, 2021Updated 5 years ago
- Build fast gradio demos of fastai learners☆35Sep 23, 2021Updated 4 years ago
- 31st place silver medal solution to USPPPM Kaggle competition☆20Jun 23, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- ☆11Dec 12, 2019Updated 6 years ago
- ☆35May 19, 2025Updated last year
- ☆61Feb 14, 2025Updated last year
- High frequency trading algorithm for Bitmex☆22Jun 22, 2020Updated 6 years ago
- A grid sampler for larger-than-memory N-dimensional images☆30Nov 11, 2025Updated 9 months ago
- A plugin based on scikit-image for segmenting nuclei and cells based on fluorescent microscopy images with high intensity in nuclei and/o…☆31May 1, 2025Updated last year
- Microsopic Image Analyzer (MIA)☆28Aug 19, 2025Updated 11 months ago
- Accelerated CellStitch for 3D labeling of anisotropic image stacks☆15Mar 1, 2026Updated 5 months ago
- Single-cell analytic toolbox that offers modular workflows for multi-level cellular annotation and user-friendly analysis reports☆11Mar 31, 2026Updated 4 months ago
- End-to-end encrypted cloud storage - Proton Drive • AdSpecial offer: 40% Off Yearly / 80% Off First Month. Protect your most important files, photos, and documents from prying eyes.
- EfficientNets in 3D variant for keras and TF.keras☆54Jan 20, 2022Updated 4 years ago
- 🤖 Autonomous Drone DJI Tello with OpenCv and ImageAI☆12Jun 18, 2019Updated 7 years ago
- A production quality data pipeline for DICOM images segmentation.☆12Feb 4, 2018Updated 8 years ago
- Fastai + PyTorch DDP in Jupyter Notebook☆27Sep 29, 2020Updated 5 years ago
- Code for StructN2V method and experiments☆23Jan 22, 2022Updated 4 years ago
- Fast and accurate pipeline for training object detector☆22Jun 8, 2021Updated 5 years ago
- Analysis and Visualisation of Hydrogen/Deuterium Exchange Mass Spectrometry Data☆11Sep 3, 2025Updated 11 months ago
- Fast style transfer☆21Apr 11, 2023Updated 3 years ago
- ☆10Jun 14, 2022Updated 4 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- A gui for browsing joint calcium imaging + behavioral data.☆57Jan 22, 2025Updated last year
- ☆13Jan 12, 2024Updated 2 years ago
- ☆10Feb 5, 2026Updated 6 months ago
- Analytical R Tools for Mass Spectrometry☆14Oct 30, 2025Updated 9 months ago
- Open source ca imaging processing tools to aquire neural traces from 2 photon image sequences☆12Aug 5, 2026Updated last week
- ☆31Updated this week
- Official implementation of PrevMatch: Revisiting and Maximizing Temporal Knowledge in Semi-supervised Semantic Segmentation☆22Jan 11, 2026Updated 7 months ago