galaxyproject / planemoLinks
Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training materials.
☆95Updated this week
Alternatives and similar repositories for planemo
Users that are interested in planemo are comparing it to the libraries listed below
Sorting:
- Galaxy Admin Training☆60Updated last month
- A Python library for interacting with the Galaxy API☆95Updated last week
- Testing building mulled containers for multi-requirement tools.☆83Updated this week
- Galaxy Workflows maintained by the Intergalactic Workflow Commission☆44Updated this week
- Utilities for building and managing bioconda recipes☆103Updated this week
- List of tools included in https://usegalaxy.eu☆34Updated this week
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆80Updated 9 months ago
- Galaxy RNA workbench☆41Updated 5 years ago
- Generating tool descriptors from bio.tools☆10Updated 7 years ago
- ENA upload cli - script your Open Data upload to the European Nucleotide Archive☆29Updated 2 months ago
- Collect of SO Ontologies☆103Updated 4 months ago
- BioContainers specifications☆52Updated 2 years ago
- A collection of reusable WDL tasks. Category:Other☆88Updated last month
- Handy command line utility for Galaxy administrators☆24Updated 3 months ago
- Docker Images tracking the stable Galaxy releases.☆234Updated this week
- A pipelining tool to automate and standardise bioinformatics analyses on cluster environments.☆98Updated 2 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.☆77Updated 3 weeks ago
- C++ Library to parse Illumina InterOp files☆80Updated 3 weeks ago
- Sequana: a set of Snakemake NGS pipelines☆151Updated last month
- Documentation and description of AWS iGenomes S3 resource.☆119Updated last year
- Galaxy Language Server to help in Galaxy (https://galaxyproject.org/) tool wrappers development.☆25Updated last week
- Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing☆133Updated 5 years ago
- UseGalaxy.EU website (compiled version https://github.com/usegalaxy-eu/usegalaxy-eu.github.io)☆22Updated this week
- Example Nextflow pipelines and programming techniques☆106Updated 3 months ago
- NGS Language Bindings☆120Updated 2 years ago
- Demonstrating best practices for bioinformatics command line tools☆117Updated 5 years ago
- Dockerised Next Generation Sequencing Pipeline (QC, Align, Calling, Annotation)☆86Updated 8 years ago
- Extension for Jupyter which integrates igv.js☆154Updated 3 years ago
- GA4GH Variation Representation Python Implementation☆61Updated this week