elixir-cloud-aai / cwl-WESLinks
Trigger CWL workflows via GA4GH WES and TES
☆18Updated last week
Alternatives and similar repositories for cwl-WES
Users that are interested in cwl-WES are comparing it to the libraries listed below
Sorting:
- CWL CommandLineTool descriptions for biology/life-sciences related applications☆80Updated 10 months ago
- The WES API is a standard way to run and manage portable workflows.☆87Updated last month
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆24Updated last week
- A repository for the schemas used for the Data Repository Service.☆63Updated 2 weeks ago
- GA4GH Variation Representation Python Implementation☆61Updated 3 weeks ago
- Collect of SO Ontologies☆102Updated 4 months ago
- GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes☆43Updated this week
- Extensible specification for representing and uniquely identifying biological sequence variation☆94Updated 2 weeks ago
- A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…☆21Updated 3 years ago
- Generating tool descriptors from bio.tools☆10Updated 7 years ago
- cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.☆19Updated 2 years ago
- C++ Library to parse Illumina InterOp files☆80Updated last month
- Nextflow Tower system☆152Updated last year
- A collection of reusable WDL tasks. Category:Other☆88Updated last month
- a place for GA4GH-related wiki pages☆16Updated 8 years ago
- Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing☆133Updated 6 years ago
- Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…☆71Updated 3 months ago
- An app store for scientific workflows, tools, notebooks, and services☆130Updated this week
- Server wrapper that turns command line tools into web services☆60Updated 7 years ago
- Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows☆38Updated last week
- Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24☆99Updated 8 years ago
- Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…☆95Updated last week
- Nextflow plugin to render provenance reports for pipeline runs. Supports standard formats such as BioCompute Object and Workflow Run RO-C…☆30Updated 3 weeks ago
- MyVariant.info: A BioThings API for human variant annotations☆97Updated 4 months ago
- Testing building mulled containers for multi-requirement tools.☆83Updated this week
- Models and APIs for Genomic data. RETIRED 2018-01-24☆220Updated 3 years ago
- [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows☆44Updated 2 years ago
- A Python library for interacting with the Galaxy API☆95Updated last week
- Example Nextflow pipelines and programming techniques☆106Updated 4 months ago
- Workflow Execution Service Backend☆20Updated last month