Alternatives and similar repositories for cwl-WES

Users that are interested in cwl-WES are comparing it to the libraries listed below

• ga4gh / data-repository-service-schemas
  A repository for the schemas used for the Data Repository Service.
  ☆63Updated 3 weeks ago
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆61Updated this week
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆80Updated 10 months ago
• ga4gh / workflow-execution-service-schemas
  The WES API is a standard way to run and manage portable workflows.
  ☆88Updated 2 months ago
• sapporo-wes / sapporo
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆21Updated 3 years ago
• bio-tools / ToolDog
  Generating tool descriptors from bio.tools
  ☆10Updated 7 years ago
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆94Updated this week
• ohsu-comp-bio / cwl-tes
  cwl-tes submits your tasks to a TES server. Task submission is parallelized when possible.
  ☆19Updated 2 years ago
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆102Updated 4 months ago
• ga4gh / wiki
  a place for GA4GH-related wiki pages
  ☆16Updated 8 years ago
• biowdl / tasks
  A collection of reusable WDL tasks. Category:Other
  ☆88Updated 2 months ago
• inab / WfExS-backend
  Workflow Execution Service Backend
  ☆20Updated last week
• ga4gh / ga4gh-server
  Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
  ☆99Updated 8 years ago
• dockstore / dockstore
  An app store for scientific workflows, tools, notebooks, and services
  ☆130Updated this week
• elixir-cloud-aai / TESK
  GA4GH Task Execution Service Root Project + Deployment scripts on Kubernetes
  ☆43Updated this week
• Illumina / interop
  C++ Library to parse Illumina InterOp files
  ☆80Updated last month
• elixir-europe / biohackathon-projects-2024
  Project code for BioHackathon Europe 2024.
  ☆28Updated last year
• seqeralabs / nf-tower
  Nextflow Tower system
  ☆152Updated last year
• galaxyproject / planemo
  Command-line utilities to assist in developing Galaxy and Common Workflow Language artifacts - including tools, workflows, and training m…
  ☆95Updated this week
• chanzuckerberg / miniwdl
  Workflow Description Language developer tools & local runner
  ☆200Updated this week
• common-workflow-language / workflow-service
  Implementation of the GA4GH Workflow Execution Service, a REST service for running workflows
  ☆38Updated this week
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• sapporo-wes / sapporo-service
  A standard implementation conforming to the Global Alliance for Genomics and Health (GA4GH) Workflow Execution Service (WES) API specific…
  ☆24Updated 2 weeks ago
• 4dn-dcic / tibanna
  Tibanna helps you run your genomic pipelines on Amazon cloud (AWS). It is used by the 4DN DCIC (4D Nucleome Data Coordination and Integr…
  ☆71Updated 3 months ago
• biocommons / hgvs
  Python library to parse, format, validate, normalize, and map sequence variants according to HGVS Nomenclature (https://hgvs-nomenclature…
  ☆288Updated last month
• ga4gh / va-spec
  An information model for representing variant annotations.
  ☆26Updated this week
• ga4gh / ga4gh-schemas
  Models and APIs for Genomic data. RETIRED 2018-01-24
  ☆220Updated 3 years ago
• SciLifeLab / Sarek
  Detect germline or somatic variants from normal or tumour/normal whole-genome or targeted sequencing
  ☆133Updated 6 years ago
• broadinstitute / cromwell-tools
  A collection of Python clients and accessory scripts for interacting with the Cromwell
  ☆23Updated 3 years ago
• Clinical-Genomics / scout
  VCF visualization interface
  ☆176Updated this week