Alternatives and similar repositories for wiki

Users that are interested in wiki are comparing it to the libraries listed below

• adamstruck / cwl2wdl
  Convert CWL to WDL
  ☆17Updated 9 years ago
• ga4gh / data-repository-service-schemas
  A repository for the schemas used for the Data Repository Service.
  ☆63Updated this week
• ga4gh / vrs
  Extensible specification for representing and uniquely identifying biological sequence variation
  ☆94Updated last week
• TheJacksonLaboratory / LIRICAL
  LIkelihood Ratio Interpretation of Clinical AbnormaLities
  ☆32Updated last month
• NCI-GDC / gdc-dnaseq-cwl
  CWL for GDC DNASeq workflows
  ☆23Updated 2 weeks ago
• broadinstitute / seqr-loading-pipelines
  hail-based pipelines for annotating variant callsets and exporting them to elasticsearch
  ☆23Updated this week
• gogetdata / ggd-recipes
  conda recipes for genomic data
  ☆84Updated 4 years ago
• PapenfussLab / PathOS
  PathOS is a clinical application for filtering, analysing and reporting on NGS variants
  ☆29Updated 4 years ago
• opencb / iva
  Generic Interactive Variant Analysis browser
  ☆29Updated 3 years ago
• PMCC-BioinformaticsCore / janis
  [Alpha] Janis: an open source tool to machine generate type-safe CWL and WDL workflows
  ☆44Updated 2 years ago
• macarthur-lab / gnomad_browser
  gnomAD browser pre-ASHG 2018
  ☆33Updated 5 years ago
• charite / jannovar
  Annotation of VCF variants with functional impact and from databases (executable+library)
  ☆63Updated 3 weeks ago
• nextflow-io / cwl2nxf
  Import a CWL workflow specification to Nextflow script (experimental)
  ☆27Updated 7 years ago
• deaconjs / ThousandVariantCallersRepo
  Thousand Variant Callers Project Repository
  ☆74Updated 6 years ago
• quinlan-lab / vcf2db
  create a gemini-compatible database from a VCF
  ☆55Updated 5 years ago
• common-workflow-library / bio-cwl-tools
  CWL CommandLineTool descriptions for biology/life-sciences related applications
  ☆80Updated 9 months ago
• common-workflow-lab / wdl2cwl
  [Experimental] Workflow Definition Language (WDL) to CWL
  ☆28Updated 4 years ago
• BD2KGenomics / toil-scripts
  Toil workflows for common genomic pipelines
  ☆33Updated 6 years ago
• bioinform / varsim
  VarSim: A high-fidelity simulation validation framework for high-throughput genome sequencing with cancer applications
  ☆90Updated last year
• The-Sequence-Ontology / SO-Ontologies
  Collect of SO Ontologies
  ☆103Updated 4 months ago
• robinandeer / puzzle
  Variant caller GUI + genetic disease analysis
  ☆22Updated 5 years ago
• ga4gh / vrs-python
  GA4GH Variation Representation Python Implementation
  ☆61Updated this week
• gatk-workflows / five-dollar-genome-analysis-pipeline
  Workflows used for WGS data processing -- replaced by https://github.com/gatk-workflows/gatk4-genome-processing-pipeline
  ☆57Updated 5 years ago
• igvteam / igv.js-flask
  Example project for integrating igv.js and flask
  ☆26Updated 7 months ago
• Clinical-Genomics / MIP
  Mutation Identification Pipeline. Read the latest documentation:
  ☆47Updated last month
• MultiQC / test-data
  Test data for MultiQC.
  ☆24Updated 2 weeks ago
• GenomiqueENS / dockerfiles
  ☆83Updated 3 years ago
• Illumina / isaac2
  Aligner for sequencing data
  ☆21Updated 9 years ago
• sigven / vcf2tsvpy
  Genomic VCF to tab-separated values
  ☆48Updated 2 years ago
• bow / crimson
  Bioinformatics tool outputs converter to JSON or YAML
  ☆35Updated 6 months ago