Simulation of Pleiotropic, Linked and Epistatic Phenotypes
☆14Sep 18, 2025Updated 5 months ago
Alternatives and similar repositories for simplePHENOTYPES
Users that are interested in simplePHENOTYPES are comparing it to the libraries listed below
Sorting:
- ☆15Jul 19, 2025Updated 7 months ago
- Lectures, documents and presentations☆15Dec 10, 2025Updated 2 months ago
- An R package to compute relationship matrices for diploid and autotetraploid species☆22Dec 12, 2025Updated 2 months ago
- Website☆16Aug 30, 2025Updated 6 months ago
- An R package for Poisson multivariate adaptive shrinkage.☆11Apr 15, 2024Updated last year
- Structural variant caller for low-depth long-read sequencing data☆30Jan 6, 2025Updated last year
- IAN: An Intelligent System for Omics Data Analysis and Discovery☆10Feb 23, 2026Updated last week
- Functions for handling RNA-seq files and formats as input and output for scrattch functions.☆11Aug 20, 2025Updated 6 months ago
- Make Your Couch a Data Pre-Processing Cent…☆15Nov 1, 2023Updated 2 years ago
- heterozygosity-based estimator of Rho - https://academic.oup.com/genetics/advance-article/doi/10.1093/genetics/iyac100/6623412☆10Aug 24, 2025Updated 6 months ago
- Characterize gene dynamics over trajectories using GLMs, GEEs, & GLMMs.☆12Feb 12, 2026Updated 2 weeks ago
- ☆13Feb 12, 2026Updated 2 weeks ago
- Upgrade to coloc☆13Aug 1, 2018Updated 7 years ago
- Analysis code and results for dreamlet☆11Jul 18, 2025Updated 7 months ago
- ☆13Jun 15, 2024Updated last year
- Workflow and script for converting genomic coordinates using MUMmer output and CrossMap☆12Sep 1, 2018Updated 7 years ago
- Added functions for Echidna in R☆11Apr 14, 2023Updated 2 years ago
- ☆10Jan 20, 2023Updated 3 years ago
- ☆10Feb 18, 2018Updated 8 years ago
- Mouse grooming neural network training and inference code for single mice in open field assays.☆10Mar 29, 2021Updated 4 years ago
- Explore the Hi-Cs☆11Nov 30, 2025Updated 3 months ago
- BLINK: A Package for Next Level of Genome Wide Association Studies with Both Individuals and Markers in Millions☆39Mar 24, 2025Updated 11 months ago
- findGSE is a tool for estimating size of (heterozygous diploid or homozygous) genomes by fitting k-mer frequencies iteratively with a ske…☆38Jan 16, 2024Updated 2 years ago
- CellAnn☆12Nov 3, 2023Updated 2 years ago
- A website to predict phenotypes of soybean by uploading .vcf files.☆17Mar 13, 2024Updated last year
- ☆10Sep 11, 2020Updated 5 years ago
- Fit phenomenological sigmoid and impulse curves with priors to improve interpretability☆10May 29, 2024Updated last year
- A hidden Markov model for detecting segments of shared ancestry (identity by descent)☆12Dec 15, 2023Updated 2 years ago
- Simulation toolbox for structural variations.☆10May 30, 2019Updated 6 years ago
- ☆10Apr 30, 2019Updated 6 years ago
- SKATE R Utilities☆10Jun 19, 2024Updated last year
- Simple colour thresholdhing for Gilgai detection☆12Mar 28, 2023Updated 2 years ago
- Course management and automation.☆16Aug 12, 2025Updated 6 months ago
- R package: determining cutoff values from bimodal data☆11Mar 17, 2024Updated last year
- Snakemake module for the snpArcher pipeline for population size change inference.☆10Nov 12, 2024Updated last year
- ☆13Feb 16, 2026Updated 2 weeks ago
- Optimizing Cancer Mutation Signatures Jointly with Sampling Likelihood☆10Aug 22, 2022Updated 3 years ago
- Reproducibility for the "Harmonization and Annotation of Single-cell Transcriptomics data with Deep Generative Models" paper☆13Jul 15, 2022Updated 3 years ago
- Trends in scientific publishing delays☆11Aug 20, 2021Updated 4 years ago