Alternatives and similar repositories for fibsem

Users that are interested in fibsem are comparing it to the libraries listed below

• basf / pyTEM
  Control and Automation of Transmission Electron Microscopes
  ☆13Updated 3 years ago
• AMCLab / TemGymBasic
  ☆30Updated last year
• sklumpe / SerialFIB
  A Modular Platform for Streamlining Automated Cryo-FIB Workflows
  ☆25Updated 11 months ago
• niermann / temscript
  Python wrapper for the scripting interface of Thermo Fisher Scientific and FEI microscopes.
  ☆49Updated 2 months ago
• mastcu / SerialEM
  ☆13Updated this week
• instamatic-dev / instamatic
  Python program for automated electron diffraction data collection
  ☆59Updated 3 weeks ago
• AMCLab / TEMGYMAdvanced
  ☆26Updated 2 years ago
• NIEHS / SmartScope
  SmartScope is a framework for systematic evaluation of cryo-EM specimens
  ☆17Updated 9 months ago
• PyJEM / PyJEM
  ☆46Updated last month
• DeMarcoLab / autolamella
  autolamella is a python package for automated cryo-lamella preparation with focused ion beam milling.
  ☆19Updated 6 months ago
• ManifoldsHu / FourDExplorer
  4DExplorer: Four dimensional scanning transmission electron microscopy (4D-STEM) imaging, reconstruction and data analysis.
  ☆29Updated 7 months ago
• cryo-et-standards / cryoet-geometry
  A possible schema for cryoET geometry metadata
  ☆11Updated 5 months ago
• cellcanvas / surforama
  a tool for using surfaces to explore volumetric data in napari
  ☆19Updated 9 months ago
• usnistgov / etspy
  A Hyperspy extension package for processing and reconstructing electron tomography data
  ☆16Updated last month
• GrotjahnLab / surface_morphometrics
  Morphometrics for Membrane Surfaces Segmented from Cryo-ET or other volumetric imaging.
  ☆31Updated this week
• spider-em / SPIDER
  SPIDER (System for Processing Image Data from Electron microscopy and Related fields) is an image processing system for electron microsc…
  ☆20Updated last month
• teamtomo / mdocfile
  SerialEM mdoc files as pandas dataframes
  ☆14Updated last week
• czimaginginstitute / AreTomo2
  ☆52Updated last year
• juglab / cryoCARE_T2T
  Singularity image for cryo-CARE
  ☆37Updated 4 years ago
• OpenChemistry / stempy
  Toolkit for 4D STEM processing on HPC using a Python interface and C++ engine. https://stempy.readthedocs.io/
  ☆27Updated last month
• ercius / openNCEM
  A collection of packages and tools for electron microscopy data analysis supported by the National Center for Electron Microscopy facilit…
  ☆66Updated last month
• hyperspy / exspy
  EDS and EELS data analysis with HyperSpy
  ☆14Updated this week
• teamtomo / membrain-seg
  membrane segmentation in 3D for cryo-ET
  ☆85Updated 2 months ago
• joverbee / pyEELSMODEL
  A python library for the quantification of eels spectra based on a modernised EELSMODEL
  ☆22Updated 2 weeks ago
• viljarjf / tiltlib
  Virtually tilt TEM samples
  ☆10Updated last year
• berkels / match-series
  ☆17Updated 5 months ago
• brisvag / blik
  Python tool for visualising and interacting with cryo-ET and subtomogram averaging data.
  ☆29Updated 2 months ago
• Ptychography-4-0 / ptychography
  Code repository for Ptychography 4.0 project.
  ☆32Updated last month
• KudryashevLab / TomoBEAR
  TomoBEAR is a configurable and customizable modular pipeline for streamlined processing of cryo-electron tomographic data for subtomogram…
  ☆29Updated 7 months ago
• r-karimi / vesicle-picker
  A program interfacing Segment Anything with cryoSPARC via cryosparc-tools to efficiently identify vesicle-embedded membrane proteins and …
  ☆12Updated 11 months ago