drostlab / metablastrView external linksLinks
Seamless Integration of BLAST Sequence Searches in R
☆30Sep 10, 2023Updated 2 years ago
Alternatives and similar repositories for metablastr
Users that are interested in metablastr are comparing it to the libraries listed below
Sorting:
- flexible pipelines for scalable secretome prediction, R package☆12Feb 21, 2019Updated 6 years ago
- N-Gram Analysis of Biological Sequences☆10Aug 30, 2024Updated last year
- Genome wide orthology inference and dNdS estimation☆96Sep 5, 2025Updated 5 months ago
- fastq quality assessment and filtering tool☆18Dec 10, 2022Updated 3 years ago
- Evolutionary Transcriptomics with R☆47Feb 6, 2026Updated last week
- QTL analysis in diallel populations☆12Dec 2, 2025Updated 2 months ago
- A project to develop the R Shiny applications.☆12May 13, 2019Updated 6 years ago
- Rust data structures and client for the PubChem REST API☆14Mar 20, 2023Updated 2 years ago
- ☆20Oct 27, 2023Updated 2 years ago
- A Toolbox for Manipulating Biological Sequences in R☆26Sep 30, 2025Updated 4 months ago
- Effect Size Computation for Meta Analysis☆21Sep 25, 2023Updated 2 years ago
- Integrative analysis of structural variations.☆40Dec 20, 2023Updated 2 years ago
- R package to query LLM for R code solutions to problems☆14Jul 27, 2025Updated 6 months ago
- hot_scan is a free software to detect genomic regions unusually rich (hotspot) in a given pattern via scan statistics☆10Oct 17, 2013Updated 12 years ago
- ARCHIVED Access sequences from the 1000 Plant Initiative (1KP)☆13Nov 7, 2025Updated 3 months ago
- A grammar of genomic data transformation☆152Nov 20, 2025Updated 2 months ago
- Interface for the Basic Local Alignment Search Tool (BLAST) - R-Package☆113Oct 7, 2025Updated 4 months ago
- 🧬 Toolkit for generating various numerical features of protein sequences☆53Aug 25, 2025Updated 5 months ago
- Please switch to https://github.com/OpenGene/defastq☆29Jul 28, 2018Updated 7 years ago
- defusion☆14Aug 24, 2021Updated 4 years ago
- R Interfaces to Phylogenetic Software☆12Sep 15, 2025Updated 4 months ago
- anor: an annotation and visualization system based on R and Shiny framework☆33Apr 20, 2020Updated 5 years ago
- Pipeline for Phylostratigraphy☆13Nov 2, 2022Updated 3 years ago
- LIME-like explanations with interpretable features based on Ceteris Paribus curves. Now on CRAN.☆14Sep 19, 2021Updated 4 years ago
- TreeGrafter is a new software tool for annotating uncharacterized protein sequences, using annotated phylogenetic trees.☆13Jul 19, 2025Updated 6 months ago
- Performs MCMCglmm on multiple phylogenetic trees☆12Apr 17, 2025Updated 9 months ago
- GitHub Actions for R-hub☆26Jan 17, 2026Updated 3 weeks ago
- Simple HTML package documentation☆12Jan 14, 2026Updated last month
- R interface to GenBank/GenPept files☆14Jan 12, 2021Updated 5 years ago
- Organize & Run Build Scripts Comfortably☆15Apr 21, 2024Updated last year
- Model and predicts species accounting for their known trophic interaction network☆18Jun 24, 2024Updated last year
- Ktrim: an extra-fast and accurate adapter- and quality-trimmer for sequencing data☆31Feb 7, 2026Updated last week
- R package MiscMetabar: Miscellaneous functions for metabarcoding analysis☆19Updated this week
- ☆14Jul 27, 2019Updated 6 years ago
- R package to quickly obtain count vectors from indexed bam files☆15Jun 13, 2025Updated 8 months ago
- Tools for extracting individual genomes from metagenomes☆16Dec 4, 2023Updated 2 years ago
- Measure Memory and CPU Usage of R Code☆22Jun 21, 2025Updated 7 months ago
- Website for my book, _A History of Data Visualization & Graphic Communication_, Harvard University Press, 2021☆14Aug 20, 2022Updated 3 years ago
- taxonomy R packages☆44Apr 16, 2024Updated last year