griffithlab / GenVisRLinks
Genome data visualizations
☆220Updated 3 months ago
Alternatives and similar repositories for GenVisR
Users that are interested in GenVisR are comparing it to the libraries listed below
Sorting:
- R package for extracting and visualizing mutational patterns in base substitution catalogues☆107Updated 2 years ago
- make enriched heatmap which visualizes the enrichment of genomic signals to specific target regions.☆196Updated last year
- karyoploteR - An R/Bioconductor package to plot arbitrary data along the genome☆342Updated 4 months ago
- Bioconductor cheat sheet☆190Updated last year
- Tools to work with variant call format files☆262Updated 7 months ago
- Statistical Analysis of RNA-Seq Tools☆107Updated 6 months ago
- ChIP peak Annotation, Comparison and Visualization☆239Updated 5 months ago
- An R package for creating Q-Q and manhattan plots from GWAS results☆170Updated last year
- Genomic Data Retrieval with R☆223Updated 2 months ago
- Differential analysis of RNA-Seq☆306Updated 4 months ago
- Light-weight Snakemake workflow for preprocessing and statistical analysis of RNA-seq data☆165Updated last week
- Publication-quality sequence logos in R☆223Updated 11 months ago
- R data package for annotating/converting Gene IDs☆166Updated 3 months ago
- Training material for introductory R / Bioconductor courses☆85Updated 2 years ago
- Create timecourse "fish plots" that show changes in the clonal architecture of tumors☆170Updated 2 years ago
- an R/shiny application for creation of Circos plot interactively☆157Updated 3 years ago
- Algorithm to implement Fraction and Copy number Estimate from Tumor/normal Sequencing.☆154Updated 2 years ago
- Materials for Genomics Data Science: Introduction to Bioconductor☆96Updated last year
- Analysis pipeline for cancer sequencing data☆110Updated 5 months ago
- Transcript quantification import for modular pipelines☆141Updated last week
- deconstructSigs☆143Updated 2 years ago
- Annotation-free quantification of RNA splicing. Yang I. Li, David A. Knowles, Jack Humphrey, Alvaro N. Barbeira, Scott P. Dickinson, Hae …☆224Updated last year
- Generic Java genotype reader / writer, QTL mapping software, Strand alignment tool☆174Updated 10 months ago
- Documentation of the Snakemake-Workflows project☆155Updated 3 years ago
- Learning the Sequence Alignment/Map format☆113Updated 2 months ago
- Grid and ggplot2 based visualization for biological data☆116Updated last week
- NGS-pipe: next-generation sequencing pipelines for precision oncology☆114Updated 6 years ago
- R package for DNA methylation analysis☆237Updated last month
- Visualize and annotate genomic coverage with ggplot2☆262Updated 8 months ago
- 🌲 An easy-to-use and scalable toolkit for genomic alteration signature (a.k.a. mutational signature) analysis and visualization in R htt…☆154Updated last month