Analysis pipelines for cancer genome sequencing in mice.
☆23Jun 19, 2026Updated 3 months ago
Alternatives and similar repositories for MoCaSeq
Users that are interested in MoCaSeq are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- CNV Rapid Aberration Detection And Reporting☆13Mar 2, 2021Updated 5 years ago
- DNA and RNA variant calling pipelines with HLA typing and Neoantigen predictions☆12Jul 8, 2021Updated 5 years ago
- INSPIRE: interpretable, flexible and spatially-aware integration of multiple spatial transcriptomics datasets from diverse sources☆23May 28, 2026Updated 4 months ago
- ☆12Apr 26, 2020Updated 6 years ago
- knowledge-based genotyping of cancer hotspots from the tumor BAM files☆22Dec 14, 2021Updated 4 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- A computational workflow for exitron splicing identification☆16Jul 17, 2026Updated 3 months ago
- issues for semina "Data Visulization"☆13Dec 23, 2025Updated 9 months ago
- a variational autoencoder method for clustering single-cell mutation data☆11Apr 17, 2024Updated 2 years ago
- Workflow: Convert CONTROL-freec output to GISTIC2☆10Apr 20, 2021Updated 5 years ago
- Public repository containing research code for the TCGA PanCanAtlas Splicing project☆42Jan 18, 2021Updated 5 years ago
- H2M is a Python pipeline for precise modeling of human variants in the mouse genome.☆14Oct 9, 2026Updated last week
- ☆20Sep 28, 2019Updated 7 years ago
- Patho-DBiT is a platform to spatially decode RNA Biology in archival FFPE tissues.☆16Aug 15, 2024Updated 2 years ago
- The analysis of the 1KCP☆17Dec 3, 2025Updated 10 months ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- ☆12Jan 12, 2024Updated 2 years ago
- Flexible Bayesian inference of mutational signatures☆43Jan 30, 2023Updated 3 years ago
- AIDA phase 1 splicing QTL paper☆16Feb 17, 2026Updated 8 months ago
- Whole genome workflows☆13Nov 9, 2024Updated last year
- ASimulatoR: splice-aware RNA-seq data simulation https://doi.org/10.1093/bioinformatics/btab142☆11Sep 6, 2022Updated 4 years ago
- A set of easy-to-use functions to analyze end read count data of RiboMethSeq (RNA 2'Ome)☆11Sep 12, 2025Updated last year
- Cell level integrated analysis of tissue histology and spatial transcriptomics☆32Oct 6, 2025Updated last year
- Calculates the Variant Allele Fraction of variants in VCF files☆19Nov 28, 2024Updated last year
- ☆19Mar 31, 2024Updated 2 years ago
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- NeoFuse is a user-friendly pipeline for the prediction of fusion neoantigens from tumor RNA-seq data.☆22Jun 22, 2026Updated 3 months ago
- Filter and prioritize fusion calls☆21May 26, 2026Updated 4 months ago
- ☆10Updated this week
- ☆29Sep 4, 2023Updated 3 years ago
- Ascertained Sequentially Markovian Coalescent☆19Oct 22, 2025Updated 11 months ago
- SEASTAR - Systematic Evaluation of Alternative transcription STArt site in RNA☆14Jan 21, 2018Updated 8 years ago
- A deme-based, spatially explicit model of intra-tumour population genetics☆21Jan 28, 2025Updated last year
- a lightweight bam file depth statistical tool☆163Jul 2, 2026Updated 3 months ago
- ☆18Nov 5, 2024Updated last year
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Building a Chinese pan-genome of 486 individuals☆12Nov 23, 2022Updated 3 years ago
- Computational pipeline to process EasySci-RNA data.☆23Jan 17, 2024Updated 2 years ago
- 肿瘤突变负荷学习笔记(tumor mutation burden)☆17Dec 10, 2019Updated 6 years ago
- Comprehensive alignment, whole-genome coverage, and capture coverage statistics.☆20Dec 17, 2024Updated last year
- ☆12Apr 25, 2026Updated 5 months ago
- This repository contains codes used for the human fetal limb cell atlas.☆17Jan 28, 2025Updated last year
- FRACTAL: framework for distributed computing to trace large accurate lineages☆24Sep 6, 2022Updated 4 years ago