raphael-group / magiLinks
A web application from the Raphael Lab for mutation annotation and genome interpretation.
☆20Updated 7 years ago
Alternatives and similar repositories for magi
Users that are interested in magi are comparing it to the libraries listed below
Sorting:
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 7 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- ☆28Updated 7 years ago
- User-friendly Bioinformatics Tools☆18Updated 4 years ago
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated 2 months ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- ☆25Updated 4 years ago
- Rapid and robust analysis of RNA-Seq experiments.☆32Updated 9 years ago
- qtools has helper functions to submit jobs to compute clusters (PBS on TSCC, SGE on oolite) from within Python☆21Updated 2 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆71Updated 2 years ago
- prioritize effects of variant annotations from VEP, SnpEff, et al.☆34Updated 9 months ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- Materials for GCB535 at Penn.☆20Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆29Updated last year
- MuSiCa - Mutational Signatures in Cancer☆23Updated last year
- NExt generation Analysis Toolbox☆14Updated 9 years ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 9 years ago
- Scalable RNA-seq analysis☆73Updated 4 years ago
- What's The Function of these genes?☆22Updated 8 years ago
- Easily run WDL workflows on GCP☆14Updated 4 years ago
- Assembly of RNA reads to determine the effect of a cancer mutation on protein sequence☆25Updated last year
- Code to reproduce analyses from the sleuth paper☆16Updated 6 years ago
- R Interface to the NCBI SRA metadata☆23Updated 6 years ago
- Chromatin segmentation in R☆19Updated 7 years ago
- ☆43Updated 9 years ago
- RNA-seq quantifications: gene expression responses to human rhinovirus infection for 6 asthmatic and 6 non-asthmatic donors (SRP046226)☆19Updated 7 years ago