raphael-group / magiLinks
A web application from the Raphael Lab for mutation annotation and genome interpretation.
☆20Updated 7 years ago
Alternatives and similar repositories for magi
Users that are interested in magi are comparing it to the libraries listed below
Sorting:
- Community-maintained list of resources that the CI4CC organization and the larger cancer informatics community have found useful or are d…☆22Updated 7 years ago
- User-friendly Bioinformatics Tools☆18Updated 4 years ago
- EpiViz is a scientific information visualization tool for genetic and epigenetic data, used to aid in the exploration and understanding o…☆71Updated 2 years ago
- Modeling and correcting fragment sequence bias for RNA-seq☆24Updated last year
- Modular blocks to build Snakemake workflows for reproducible NGS analyses☆22Updated 6 years ago
- R package for extracting mutation signatures from a list of somatic mutations☆37Updated 6 years ago
- Materials for GCB535 at Penn.☆20Updated 6 years ago
- ☆26Updated 5 years ago
- Tutorial for working with cloud infrastructure and AWS from R☆20Updated 8 years ago
- SMBL - SnakeMake Bioinformatics Library. Automatic installation of bioinformatics software in your SnakeMake pipelines.☆23Updated 8 years ago
- Curated collection of open-source bioinformatics tools☆28Updated 6 years ago
- BigWig manpulation tools using libBigWig and htslib☆30Updated last year
- MuSiCa - Mutational Signatures in Cancer☆23Updated 2 years ago
- ☆28Updated 7 years ago
- Curated Data From The Cancer Genome Atlas (TCGA) as MultiAssayExperiment Objects☆44Updated 2 months ago
- fast webservices based query tool for large sets of genomic features☆25Updated 8 months ago
- Scripts for reproducing analyses of large RNA-seq datasets☆15Updated 6 years ago
- A server for maintaining high-throughput sequencing QC data☆13Updated 5 months ago
- Allele frequency filter app☆14Updated 3 years ago
- A hierarchical multiscale model for inferring transcription factor binding from chromatin accessibility data.☆26Updated 9 years ago
- ChIP-seq peak calling with GC effects adjustment☆10Updated 7 years ago
- R Interface to the NCBI SRA metadata☆23Updated 7 years ago
- Scalable RNA-seq analysis☆73Updated 5 years ago
- [DEPRECATED] An R package for Google Genomics API queries.☆45Updated 2 years ago
- A Practical (And Opinionated) Guide To Analyzing 450K Data☆35Updated 11 years ago
- 7C: Computational Chromosome Conformation Capture by Correlation of ChIP-seq at CTCF motifs☆13Updated 3 months ago
- A python script used to annotate genomic intervals.☆18Updated 5 years ago
- Toil workflows for common genomic pipelines☆33Updated 6 years ago
- Epigenetic Variability and Transcription Factor Motifs Analysis Pipeline☆31Updated 8 years ago
- Easily run WDL workflows on GCP☆14Updated 4 years ago