Drug Response Variational Autoencoder
☆34Apr 4, 2019Updated 7 years ago
Alternatives and similar repositories for DrVAE
Users that are interested in DrVAE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction☆32Sep 27, 2021Updated 4 years ago
- Scripts associated with the 2023 Open Problems competition☆11Nov 23, 2023Updated 2 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Oct 17, 2023Updated 2 years ago
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆22Sep 21, 2021Updated 4 years ago
- Cancer Drug Response Prediction via a Hybrid Graph Convolutional Network☆104Jun 26, 2023Updated 2 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Code for our paper "Fair k-Center Clustering for Data Summarization"☆12Apr 26, 2019Updated 7 years ago
- Single cell perturbation prediction☆345Dec 5, 2024Updated last year
- Predictors for Blood-Brain Barrier Permeability with resampling strategies based on B3DB database.☆13Aug 12, 2025Updated 9 months ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆62Jul 22, 2024Updated last year
- Load biophysicochemical properties of amino acids, Kidera factors and Atchley factors into R and Python in only a single line.☆16Nov 3, 2019Updated 6 years ago
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆149Feb 6, 2025Updated last year
- Connectivity Map analysis in MATLAB☆49Dec 10, 2021Updated 4 years ago
- An experimental repo for experimenting with PyTorch models☆38Mar 24, 2023Updated 3 years ago
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆53Feb 11, 2026Updated 3 months ago
- Proton VPN Special Offer - Get 70% off • AdSpecial partner offer. Trusted by over 100 million users worldwide. Tested, Approved and Recommended by Experts.
- Web application for protein-ligand binding sites analysis and visualization☆16Jan 9, 2023Updated 3 years ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆15Dec 15, 2025Updated 5 months ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆15Nov 30, 2022Updated 3 years ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆13Dec 13, 2024Updated last year
- Learning retrosynthetic pathway design using simulated experience☆20May 19, 2019Updated 7 years ago
- Jupyters, Py, Docs & extra resources that have been used in class or will be used in the future.☆10Apr 2, 2021Updated 5 years ago
- crawl4ai, DeepSeek, Groq☆11Feb 19, 2025Updated last year
- Generative RNN for molecule de novo design☆20Jan 21, 2022Updated 4 years ago
- Core code for the paper "A Generative Model For Electron Paths" (https://openreview.net/forum?id=r1x4BnCqKX).☆18Jun 13, 2019Updated 6 years ago
- Simple, predictable pricing with DigitalOcean hosting • AdAlways know what you'll pay with monthly caps and flat pricing. Enterprise-grade infrastructure trusted by 600k+ customers.
- Molecular Generation for Desired Transcriptome Changes with Adversarial Autoencoders☆53Feb 19, 2026Updated 3 months ago
- Multi-Layer Network Model leverages identification of spatial domains from spatial transcriptomics data☆13Aug 25, 2024Updated last year
- ☆11Sep 7, 2023Updated 2 years ago
- ☆35Apr 29, 2025Updated last year
- Implicit generative models and related stuff based on the MMD, in PyTorch☆16Sep 24, 2020Updated 5 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆26Mar 21, 2024Updated 2 years ago
- Code for "Molecular Hypergraph Grammar with Its Application to Molecular Optimization"☆39Dec 10, 2024Updated last year
- ☆12Nov 9, 2020Updated 5 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Canonical normalizing flows☆10Apr 30, 2019Updated 7 years ago
- pre-training BERT with molecular data☆51Oct 13, 2021Updated 4 years ago
- code and dataset for spatialDWLS☆14Apr 18, 2021Updated 5 years ago
- Notebooks for CPA figures☆15Dec 9, 2022Updated 3 years ago
- 总结和比较目前发表的处理单细胞空间转录组学(Spatial Transcriptomic)的聚类方法。Conclusion and comparison of the current clustering method for ST data.☆12May 31, 2023Updated 2 years ago
- A visible neural network model for drug response prediction☆157Sep 13, 2023Updated 2 years ago
- Utility functions for weights and biases (wandb).☆11Sep 17, 2024Updated last year