Drug Response Variational Autoencoder
☆34Apr 4, 2019Updated 7 years ago
Alternatives and similar repositories for DrVAE
Users that are interested in DrVAE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- GraphCDR: A graph neural network method with contrastive learning for cancer drug response prediction☆32Sep 27, 2021Updated 4 years ago
- Scripts associated with the 2023 Open Problems competition☆10Nov 23, 2023Updated 2 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Oct 17, 2023Updated 2 years ago
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆22Sep 21, 2021Updated 4 years ago
- Single cell perturbation prediction☆355Dec 5, 2024Updated last year
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Predictors for Blood-Brain Barrier Permeability with resampling strategies based on B3DB database.☆13Aug 12, 2025Updated last year
- A standard library for biological research.☆38Sep 2, 2025Updated last year
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆53Feb 11, 2026Updated 7 months ago
- Web application for protein-ligand binding sites analysis and visualization☆16Jan 9, 2023Updated 3 years ago
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆158Feb 6, 2025Updated last year
- Connectivity Map analysis in MATLAB☆51Dec 10, 2021Updated 4 years ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- Jupyters, Py, Docs & extra resources that have been used in class or will be used in the future.☆10Apr 2, 2021Updated 5 years ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆16Dec 15, 2025Updated 8 months ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- MOVE (Multi-Omics Variational autoEncoder) for integrating multi-omics data and identifying cross modal associations☆100Sep 1, 2026Updated last week
- Multi-slice Spatial Transcriptome Domain Analysis.☆12Dec 13, 2024Updated last year
- Learning retrosynthetic pathway design using simulated experience☆19May 19, 2019Updated 7 years ago
- 总结和比较目前发表的处理单细胞空间转录组学(Spatial Transcriptomic)的聚类方法。Conclusion and comparison of the current clustering method for ST data.☆12May 31, 2023Updated 3 years ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆15Nov 30, 2022Updated 3 years ago
- Multi-Layer Network Model leverages identification of spatial domains from spatial transcriptomics data☆13Aug 25, 2024Updated 2 years ago
- Core code for the paper "A Generative Model For Electron Paths" (https://openreview.net/forum?id=r1x4BnCqKX).☆18Jun 13, 2019Updated 7 years ago
- Molecular Generation for Desired Transcriptome Changes with Adversarial Autoencoders☆54Jul 17, 2026Updated last month
- Code for "Molecular Hypergraph Grammar with Its Application to Molecular Optimization"☆38Dec 10, 2024Updated last year
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- ☆35Apr 29, 2025Updated last year
- Processing SIDER 4.1: the side effect resource☆23Feb 3, 2016Updated 10 years ago
- ☆11Sep 7, 2023Updated 3 years ago
- ☆38Oct 8, 2021Updated 4 years ago
- A NBA App developed by Ionic2☆12Oct 13, 2016Updated 9 years ago
- ☆12Nov 9, 2020Updated 5 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- pre-training BERT with molecular data☆51Oct 13, 2021Updated 4 years ago
- EDF solves the multi-view features fusion problem by searching an optimal combination scheme of different basic fusion operators.☆11Jan 23, 2022Updated 4 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- See http://dx.doi.org/10.1039/C7SC04156J for more details☆11Aug 28, 2023Updated 3 years ago
- A visible neural network model for drug response prediction☆155Sep 13, 2023Updated 2 years ago
- Utility functions for weights and biases (wandb).☆11Sep 17, 2024Updated last year
- A deep-learning framework for multi-omics integration (RNA-seq, CNV, DNA methylation, etc.)☆35Aug 28, 2026Updated 2 weeks ago
- LoopPredictor: Predicting unknown enhancer-mediated genome topology by an ensemble machine learning model☆14Jun 18, 2021Updated 5 years ago
- Implementation of the AIControl paper in Julia 1.0☆17Mar 4, 2019Updated 7 years ago
- K-RET: Knowledgeable Biomedical Relation Extraction System☆11Feb 22, 2025Updated last year