Drug Response Variational Autoencoder
☆35Apr 4, 2019Updated 7 years ago
Alternatives and similar repositories for DrVAE
Users that are interested in DrVAE are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- Predicting cancer drug response using parallel heterogeneous graph convolutional networks with neighborhood interactions☆10Oct 26, 2022Updated 3 years ago
- Predicting mechanism of action of novelcompounds using compound structure andtranscriptomic signature co-embedding☆14Oct 17, 2023Updated 3 years ago
- Core code for the paper "A deep learning model for drug response prediction from cancer genomic signatures and compound chemical structur…☆22Sep 21, 2021Updated 5 years ago
- ☆15Sep 14, 2021Updated 5 years ago
- For replication of the experiments in the paper Learning Robust Representations by Projecting Superficial Statistics Out☆13Oct 22, 2019Updated 7 years ago
- Managed Database hosting by DigitalOcean • AdPostgreSQL, MySQL, MongoDB, Kafka, Valkey, and OpenSearch available. Automatically scale up storage and focus on building your apps.
- Single cell perturbation prediction☆361Dec 5, 2024Updated last year
- An experimental repo for experimenting with PyTorch models☆38Mar 24, 2023Updated 3 years ago
- Deep Transfer Learning of Drug Sensitivity by Integrating Bulk and Single-cell RNA-seq data☆64Jul 22, 2024Updated 2 years ago
- Load biophysicochemical properties of amino acids, Kidera factors and Atchley factors into R and Python in only a single line.☆17Nov 3, 2019Updated 6 years ago
- A tutorial on learned non-adversarial invariance in neural networks☆14Dec 8, 2019Updated 6 years ago
- ☆38Oct 8, 2021Updated 5 years ago
- Web application for protein-ligand binding sites analysis and visualization☆16Jan 9, 2023Updated 3 years ago
- Predictors for Blood-Brain Barrier Permeability with resampling strategies based on B3DB database.☆13Aug 12, 2025Updated last year
- PyTorch implementation of bimodal neural networks for drug-cell (pharmarcogenomics) and drug-protein (proteochemometrics) interaction pre…☆53Feb 11, 2026Updated 8 months ago
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- stMMR☆12Oct 1, 2024Updated 2 years ago
- analyses of scRNAseq and spatial transcriptomics dataset of developing human pancreas at multiple gestational stages☆10Jan 30, 2023Updated 3 years ago
- ☆16Aug 22, 2025Updated last year
- ☆30Jan 4, 2024Updated 2 years ago
- Code for "Predicting Cellular Responses to Novel Drug Perturbations at a Single-Cell Resolution", NeurIPS 2022.☆162Feb 6, 2025Updated last year
- Connectivity Map analysis in MATLAB☆52Dec 10, 2021Updated 4 years ago
- an efficient data integration method for multiple spatial transcriptomics data with non- cluster-relevant effects such as the complex batc…☆17Dec 15, 2025Updated 10 months ago
- ☆12Dec 19, 2022Updated 3 years ago
- ☆14Jan 25, 2023Updated 3 years ago
- Deploy to Railway using AI coding agents - Free Credits Offer • AdUse Claude Code, Codex, OpenCode, and more. Autonomous software development now has the infrastructure to match with Railway.
- Generative RNN for molecule de novo design☆20Jan 21, 2022Updated 4 years ago
- 总结和比较目前发表的处理单细胞空间转录组学(Spatial Transcriptomic)的聚类方法。Conclusion and comparison of the current clustering method for ST data.☆12May 31, 2023Updated 3 years ago
- Multi-Layer Network Model leverages identification of spatial domains from spatial transcriptomics data☆13Aug 25, 2024Updated 2 years ago
- [IJMS 2022] DRPreter: Interpretable Anticancer Drug Response Prediction Using Knowledge-Guided Graph Neural Networks and Transformer☆15Nov 30, 2022Updated 3 years ago
- Learning retrosynthetic pathway design using simulated experience☆19May 19, 2019Updated 7 years ago
- Multi-slice Spatial Transcriptome Domain Analysis.☆12Dec 13, 2024Updated last year
- Core code for the paper "A Generative Model For Electron Paths" (https://openreview.net/forum?id=r1x4BnCqKX).☆18Jun 13, 2019Updated 7 years ago
- Molecular Generation for Desired Transcriptome Changes with Adversarial Autoencoders☆54Jul 17, 2026Updated 3 months ago
- Processing SIDER 4.1: the side effect resource☆23Feb 3, 2016Updated 10 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- Processing high-throughput drug indication resources.☆21Mar 15, 2016Updated 10 years ago
- An unofficial re-implementation of AntiBERTy, an antibody-specific protein language model, in PyTorch.☆26Mar 21, 2024Updated 2 years ago
- The main repository for ACTIVA: realistic single-cell RNA-seq generation with automatic cell-type identification using introspective vari…☆10Jan 23, 2023Updated 3 years ago
- EDF solves the multi-view features fusion problem by searching an optimal combination scheme of different basic fusion operators.☆11Jan 23, 2022Updated 4 years ago
- ☆11Jul 1, 2025Updated last year
- Camiel's scATAC-seq analysis pipeline☆15Apr 15, 2024Updated 2 years ago
- Canonical normalizing flows☆10Apr 30, 2019Updated 7 years ago