ramanathanlab / genslmLinks
GenSLMs: Genome-scale language models reveal SARS-CoV-2 evolutionary dynamics
☆132Updated 10 months ago
Alternatives and similar repositories for genslm
Users that are interested in genslm are comparing it to the libraries listed below
Sorting:
- Repository for mRNA Paper and CodonBERT publication.☆131Updated last year
- Deep networks for protein functional inference☆175Updated last month
- ☆69Updated 2 months ago
- RiboNucleic Acid (RNA) Language Model☆114Updated last month
- Benchmarking DNA Language Models on Biologically Meaningful Tasks☆120Updated 8 months ago
- Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…☆171Updated last year
- AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…☆105Updated last week
- Primary RNA sequence model☆38Updated last year
- ☆131Updated 2 years ago
- Compressing protein structures effectively with torsion angles☆174Updated 2 weeks ago
- Inference and numerics for multi-hybrid AI model architectures☆69Updated this week
- Benchmarks for classification of genomic sequences☆149Updated 4 months ago
- ☆248Updated 11 months ago
- CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 speci…☆162Updated 2 weeks ago
- ☆77Updated 2 years ago
- Evolutionary velocity with protein language models☆93Updated last year
- Official repository for the paper "Large-scale clinical interpretation of genetic variants using evolutionary data and deep learning". Jo…☆177Updated last year
- Protein language model trained on coding DNA☆47Updated 8 months ago
- MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration☆135Updated 3 weeks ago
- A generative latent variable model for biological sequence families.☆226Updated 3 years ago
- Biological prediction models made simple.☆44Updated last week
- Improving RNA structure prediction through multitask learning on diverse crowdsourced data.☆62Updated last year
- Language modeling of viral evolution☆144Updated 2 years ago
- MSA Transformer reproduction code☆83Updated 3 years ago
- Sandbox for Deep-Learning based Computational Protein Design☆113Updated 3 weeks ago
- Neural Networks for Protein Sequence Alignment☆124Updated 8 months ago
- Multi-task and masked language model-based protein sequence embedding models.☆102Updated 4 years ago
- ☆58Updated last year
- Versatile computational pipeline for processing protein structure data for deep learning applications.☆264Updated last year
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆163Updated 10 months ago