Alternatives and similar repositories for genslm

Users that are interested in genslm are comparing it to the libraries listed below

• Sanofi-Public / CodonBERT
  Repository for mRNA Paper and CodonBERT publication.
  ☆134Updated last year
• google-research / proteinfer
  Deep networks for protein functional inference
  ☆177Updated 3 months ago
• genbio-ai / AIDO
  AI-Driven Digital Organism (AIDO) is a system of multiscale foundation models for predicting, simulating and programming biology at all l…
  ☆122Updated last week
• Zuricho / ParallelFold
  Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting…
  ☆168Updated last year
• biomap-research / xTrimoMultimer
  ☆78Updated 2 years ago
• microsoft / protein-sequence-models
  ☆251Updated last year
• mxfold / mxfold2
  MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration
  ☆142Updated 2 months ago
• frederikkemarin / BEND
  Benchmarking DNA Language Models on Biologically Meaningful Tasks
  ☆124Updated 10 months ago
• lbcb-sci / RiNALMo
  RiboNucleic Acid (RNA) Language Model
  ☆126Updated 3 months ago
• spetti / SMURF
  ☆132Updated 3 years ago
• eternagame / EternaFold
  Improving RNA structure prediction through multitask learning on diverse crowdsourced data.
  ☆62Updated last year
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆265Updated last year
• steineggerlab / foldcomp
  Compressing protein structures effectively with torsion angles
  ☆177Updated last month
• brianhie / evolocity
  Evolutionary velocity with protein language models
  ☆94Updated last year
• Adibvafa / CodonTransformer
  CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 speci…
  ☆175Updated last month
• rmrao / msa-transformer
  MSA Transformer reproduction code
  ☆84Updated 3 years ago
• brianhie / viral-mutation
  Language modeling of viral evolution
  ☆146Updated 2 years ago
• flatironinstitute / deepblast
  Neural Networks for Protein Sequence Alignment
  ☆125Updated 10 months ago
• OATML-Markslab / Tranception
  Official repository for the paper "Tranception: Protein Fitness Prediction with Autoregressive Transformers and Inference-time Retrieval"
  ☆160Updated 2 years ago
• HannesStark / protein-localization
  Using Transformer protein embeddings with a linear attention mechanism to make SOTA de-novo predictions for the subcellular location of p…
  ☆67Updated 2 years ago
• chenkenbio / SpliceBERT
  Primary RNA sequence model
  ☆38Updated last year
• debbiemarkslab / DeepSequence
  A generative latent variable model for biological sequence families.
  ☆236Updated 3 years ago
• martinez-zacharya / TRILL
  Sandbox for Deep-Learning based Computational Protein Design
  ☆116Updated 2 months ago
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆276Updated 2 weeks ago
• ML-Bioinfo-CEITEC / genomic_benchmarks
  Benchmarks for classification of genomic sequences
  ☆157Updated last month
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆365Updated last year
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆268Updated 8 months ago
• lucidrains / chroma-pytorch
  Implementation of Chroma, generative models of protein using DDPM and GNNs, in Pytorch
  ☆159Updated 2 years ago
• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆163Updated last year
• aqlaboratory / rgn2
  ☆107Updated last year