Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting multiple structures
☆175Feb 25, 2024Updated 2 years ago
Alternatives and similar repositories for ParallelFold
Users that are interested in ParallelFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AlphaFold2 non-docker setup☆378Nov 24, 2023Updated 2 years ago
- Open source code for AlphaFold.☆22Jan 28, 2022Updated 4 years ago
- ColabFold on your local PC☆853Apr 21, 2026Updated last week
- A C, C++, Python project focusing on Docking analysis, Source code, Blogs, Data availability, References.☆26Jan 27, 2026Updated 3 months ago
- Making Protein folding accessible to all!☆2,746Updated this week
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆174Sep 8, 2024Updated last year
- Trainable AlphaFold implementation in JAX☆158Aug 6, 2022Updated 3 years ago
- AlphaLink: Integrating crosslinking MS data into OpenFold☆74Dec 14, 2023Updated 2 years ago
- A collection of *fold* tools☆305Aug 8, 2025Updated 8 months ago
- Optimizing AlphaFold Training and Inference on GPU Clusters☆612Jul 16, 2024Updated last year
- An open-source platform for developing protein models beyond AlphaFold.☆417Jun 26, 2024Updated last year
- Making Protein Design accessible to all via Google Colab!☆912Apr 6, 2026Updated 3 weeks ago
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆72Apr 13, 2026Updated 3 weeks ago
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,226Mar 10, 2026Updated last month
- Wordpress hosting with auto-scaling - Free Trial Offer • AdFully Managed hosting for WordPress and WooCommerce businesses that need reliable, auto-scalable performance. Cloudways SafeUpdates now available.
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,354Dec 16, 2025Updated 4 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆74Jul 2, 2025Updated 10 months ago
- OmegaFold Release Code☆618Dec 12, 2022Updated 3 years ago
- ☆135Sep 14, 2022Updated 3 years ago
- Remote protein homology detection suite.☆617Aug 12, 2025Updated 8 months ago
- Protein hallucination and inpainting with RoseTTAFold☆281Mar 30, 2023Updated 3 years ago
- Virus Protein Structural Analysis Toolkit☆13Sep 9, 2024Updated last year
- ☆802May 27, 2025Updated 11 months ago
- Multiple Protein Structure Alignment at Scale with FoldMason☆272Apr 27, 2026Updated last week
- Open source password manager - Proton Pass • AdSecurely store, share, and autofill your credentials with Proton Pass, the end-to-end encrypted password manager trusted by millions.
- pytorch implementation of trDesign☆45Mar 19, 2021Updated 5 years ago
- open source repository☆148Nov 30, 2023Updated 2 years ago
- A fine-tuned version of ProteinMPNN for generating stable cyclic peptide sequences☆38Feb 2, 2026Updated 3 months ago
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆98Aug 29, 2023Updated 2 years ago
- ☆16Jan 10, 2023Updated 3 years ago
- ☆212Apr 21, 2025Updated last year
- Official repository for the ProteinGym benchmarks☆421Mar 25, 2026Updated last month
- ☆47Sep 16, 2024Updated last year
- Implementation of Accurate Protein Structure Prediction by Embeddings and Deep Learning Representations☆24Feb 20, 2020Updated 6 years ago
- Virtual machines for every use case on DigitalOcean • AdGet dependable uptime with 99.99% SLA, simple security tools, and predictable monthly pricing with DigitalOcean's virtual machines, called Droplets.
- Code for running RFdiffusion☆2,857Apr 24, 2026Updated last week
- ☆309Apr 23, 2026Updated last week
- Code and Pre-Trained Models for "AttnPacker: An end-to-end deep learning method for protein side-chain packing"☆93Dec 29, 2023Updated 2 years ago
- ☆15Jun 3, 2025Updated 11 months ago
- ☆402Aug 7, 2024Updated last year
- ☆20Oct 4, 2022Updated 3 years ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆99Jul 29, 2024Updated last year