Alternatives and similar repositories for ParallelFold

Users that are interested in ParallelFold are comparing it to the libraries listed below

• FreshAirTonight / af2complex
  Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.
  ☆168Updated last year
• kuixu / alphafold
  Install alphafold on the local machine, get out of docker.
  ☆103Updated 4 years ago
• uw-ipd / RoseTTAFold2NA
  RoseTTAFold2 protein/nucleic acid complex prediction
  ☆373Updated last year
• pylelab / USalign
  Universal Structure Alignment of Monomeric and Complex Structure of Nucleic Acids and Proteins
  ☆174Updated this week
• oxpig / ANARCI
  Antibody Numbering and Antigen Receptor ClassIfication
  ☆262Updated last year
• mxfold / mxfold2
  MXfold2: RNA secondary structure prediction using deep learning with thermodynamic integration
  ☆158Updated last week
• KosinskiLab / AlphaPulldown
  ☆303Updated this week
• debbiemarkslab / EVcouplings
  Evolutionary couplings from protein and RNA sequence alignments
  ☆296Updated 3 months ago
• kalininalab / alphafold_non_docker
  AlphaFold2 non-docker setup
  ☆374Updated 2 years ago
• mheinzinger / ProstT5
  Bilingual Language Model for Protein Sequence and Structure
  ☆297Updated last year
• biolists / folding_tools
  A collection of *fold* tools
  ☆302Updated 6 months ago
• brianhie / efficient-evolution
  Efficient evolution from protein language models
  ☆220Updated 2 years ago
• phbradley / alphafold_finetune
  Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions
  ☆170Updated 2 years ago
• JeffSHF / ColabDock
  Code for ColabDock paper
  ☆151Updated 9 months ago
• steineggerlab / foldcomp
  Compressing protein structures effectively with torsion angles
  ☆186Updated last month
• SysBioChalmers / DLKcat
  Deep learning and Bayesian approach applied to enzyme turnover number for the improvement of enzyme-constrained genome-scale metabolic mo…
  ☆183Updated 2 years ago
• ProteinDesignLab / protein-design-tutorials
  Tutorials, cheat sheets, and other resources for computational methods for protein design.
  ☆131Updated 2 years ago
• adaptyvbio / ProteinFlow
  Versatile computational pipeline for processing protein structure data for deep learning applications.
  ☆272Updated last year
• Merck / BioPhi
  BioPhi is an open-source antibody design platform. It features methods for automated antibody humanization (Sapiens), humanness evaluatio…
  ☆225Updated 8 months ago
• PDB-REDO / dssp
  Application to assign secondary structure to proteins
  ☆242Updated last week
• RosettaCommons / trRosetta2
  Repository for publicly available deep learning models developed in Rosetta community
  ☆123Updated 4 years ago
• RosettaCommons / DeepAb
  Deep learning models and structure realization scripts for the DeepAb antibody structure prediction method.
  ☆167Updated 3 years ago
• haddocking / haddock3
  Official repo of the modular BioExcel version of HADDOCK
  ☆221Updated this week
• tttianhao / CLEAN
  CLEAN: a contrastive learning model for high-quality functional prediction of proteins
  ☆304Updated 10 months ago
• uw-ipd / RoseTTAFold2
  ☆208Updated 9 months ago
• gjoni / trDesign
  trRosetta for protein design
  ☆183Updated 4 years ago
• twopin / CAMP
  predicting peptide-protein interactions
  ☆137Updated 2 years ago
• westlake-repl / ProTrek
  ProTrek: illuminating the Protein Universe through Trimodal Protein Language Model
  ☆191Updated 2 months ago
• mmagnus / rna-tools
  🔧rna-tools: a toolbox to analyze sequences, structures and simulations of RNA (and more) used by RNA CASP, RNA PUZZLES, and me ;-) docs …
  ☆181Updated 3 weeks ago
• haddocking / prodigy
  Predict the binding affinity of protein-protein complexes from structural data
  ☆172Updated 4 months ago