Modified version of Alphafold to divide CPU part (MSA and template searching) and GPU part. This can accelerate Alphafold when predicting multiple structures
☆174Feb 25, 2024Updated 2 years ago
Alternatives and similar repositories for ParallelFold
Users that are interested in ParallelFold are comparing it to the libraries listed below. We may earn a commission when you buy through links labeled 'Ad' on this page.
Sorting:
- AlphaFold2 non-docker setup☆380Nov 24, 2023Updated 2 years ago
- Open source code for AlphaFold.☆22Jan 28, 2022Updated 4 years ago
- ColabFold on your local PC☆882Jul 1, 2026Updated 3 months ago
- Fine-tune AlphaFold 3, AlphaFold 2, Boltz-1, and Boltz-2 on downstream protein tasks. Algorithm notebooks and papers are the supporting l…☆29Updated this week
- Making Protein folding accessible to all!☆2,959Updated this week
- 1-Click AI Models by DigitalOcean Gradient • AdDeploy popular AI models on DigitalOcean Gradient GPU virtual machines with just a single click. Zero configuration with optimized deployments.
- Trainable AlphaFold implementation in JAX☆158Aug 6, 2022Updated 4 years ago
- Predicting direct protein-protein interactions with AlphaFold deep learning neural network models.☆177Sep 8, 2024Updated 2 years ago
- AlphaLink: Integrating crosslinking MS data into OpenFold☆77Dec 14, 2023Updated 2 years ago
- A collection of *fold* tools☆303Aug 8, 2025Updated last year
- Optimizing AlphaFold Training and Inference on GPU Clusters☆616Jul 16, 2024Updated 2 years ago
- An open-source platform for developing protein models beyond AlphaFold.☆424Jun 26, 2024Updated 2 years ago
- Making Protein Design accessible to all via Google Colab!☆947Updated this week
- Improved protein complex prediction with AlphaFold-multimer by denoising the MSA profile☆73Apr 13, 2026Updated 6 months ago
- Foldseek enables fast and sensitive comparisons of large structure sets.☆1,308Sep 9, 2026Updated last month
- Serverless GPU API endpoints on Runpod - Get Bonus Credits • AdSkip the infrastructure headaches. Auto-scaling, pay-as-you-go, no-ops approach lets you focus on innovating your application.
- ☆137Sep 14, 2022Updated 4 years ago
- Trainable, memory-efficient, and GPU-friendly PyTorch reproduction of AlphaFold 2☆3,437Dec 16, 2025Updated 9 months ago
- HyperMPNN ‒ A general strategy to design thermostable proteins learned from hyperthermophiles☆90Jul 2, 2025Updated last year
- OmegaFold Release Code☆627Dec 12, 2022Updated 3 years ago
- Protein hallucination and inpainting with RoseTTAFold☆286Mar 30, 2023Updated 3 years ago
- Remote protein homology detection suite.☆628Oct 7, 2026Updated last week
- pytorch implementation of trDesign☆45Mar 19, 2021Updated 5 years ago
- Virus Protein Structural Analysis Toolkit☆15Sep 9, 2024Updated 2 years ago
- open source repository☆149Nov 30, 2023Updated 2 years ago
- Managed hosting for WordPress and PHP on Cloudways • AdManaged hosting for WordPress, Magento, Laravel, or PHP apps, on multiple cloud providers. Deploy in minutes on Cloudways by DigitalOcean.
- A series of scripts that facilitate the prediction of protein structures in multiple conformations using AlphaFold2☆99Aug 29, 2023Updated 3 years ago
- ☆826May 18, 2026Updated 4 months ago
- ☆16Jan 10, 2023Updated 3 years ago
- ☆214Apr 21, 2025Updated last year
- ☆19Oct 4, 2022Updated 4 years ago
- Implementation of Accurate Protein Structure Prediction by Embeddings and Deep Learning Representations☆23Feb 20, 2020Updated 6 years ago
- ☆324Updated this week
- ☆17Jun 3, 2025Updated last year
- Code and Pre-Trained Models for "AttnPacker: An end-to-end deep learning method for protein side-chain packing"☆96Dec 29, 2023Updated 2 years ago
- AI Agents on DigitalOcean Gradient AI Platform • AdBuild production-ready AI agents using customizable tools or access multiple LLMs through a single endpoint. Create custom knowledge bases or connect external data.
- ☆419Aug 7, 2024Updated 2 years ago
- Code for running RFdiffusion☆3,086Jul 15, 2026Updated 2 months ago
- Flexible Protein-Protein Docking with a Multi-Track Iterative Transformer.☆102Jul 29, 2024Updated 2 years ago
- ☆121Dec 7, 2022Updated 3 years ago
- This package contains deep learning models and related scripts for RoseTTAFold☆2,271Feb 15, 2024Updated 2 years ago
- ☆47Sep 16, 2024Updated 2 years ago
- Source code of the paper "Protein Sequence and Structure Co-Design with Equivariant Translation"☆24Sep 18, 2023Updated 3 years ago